Mutant Information 

Mutant NameFN-44  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 11

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr118137210A-THomoINTRON
SBS  Chr41528263C-THomoINTERGENIC
SBS  Chr429345196A-GHETINTERGENIC
SBS  Chr512270422C-AHomoINTERGENIC
SBS  Chr516352382G-AHomoINTERGENIC
SBS  Chr615810741C-AHomoINTERGENIC
SBS  Chr710356416A-GHomoINTERGENIC
SBS  Chr712107636G-AHomoINTERGENIC
SBS  Chr712466190T-GHETINTERGENIC
SBS  Chr813509105A-GHomoINTERGENIC
SBS  Chr914633705C-THomoINTERGENIC

Deletions: 13

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1945884294588431
Deletion  Chr124976720249767211
Deletion  Chr195219169522089173
Deletion  Chr1114641605146416061
Deletion  Chr12296941829694191
Deletion  Chr2210089562100896711
Deletion  Chr224201841242018476
Deletion  Chr2262522352625224914
Deletion  Chr31205800112083000250003
Deletion  Chr31208800112139000510007
Deletion  Chr421422708214227091
Deletion  Chr615684862156848719LOC_Os06g27700
Deletion  Chr778400017869000290005

Inversions: 7

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr187269388956457
Inversion  Chr187269718956480
Inversion  Chr312172171438786LOC_Os03g02980
Inversion  Chr312172171438786LOC_Os03g03370
Inversion  Chr312380291438777LOC_Os03g03034
Inversion  Chr312380291438777LOC_Os03g03370
Inversion  Chr31205778912088100LOC_Os03g21190

Translocations: 5

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr31201340Chr19392112LOC_Os03g02970
Translocation  Chr31217210Chr19392079LOC_Os03g02980
Translocation  Chr77863540Chr312139315
Translocation  Chr615612845Chr116478195LOC_Os01g29390
Translocation  Chr616310928Chr116478536LOC_Os01g29390