Mutant Information 

Mutant NameFN-47  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 8

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr212719670C-THomoINTERGENIC
SBS  Chr312786022T-AHomoINTERGENIC
SBS  Chr417297947C-AHomoINTRON
SBS  Chr515014735T-AHomoINTERGENIC
SBS  Chr61272072G-AHomoINTERGENIC
SBS  Chr610925516G-AHomoINTERGENIC
SBS  Chr725262941C-GHomoINTERGENIC
SBS  Chr86957105G-AHomoNON_SYNONYMOUS_CODINGLOC_Os08g11860

Deletions: 13

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr123321514233215217
Deletion  Chr1440967944096801
Deletion  Chr117050001717300012300015
Deletion  Chr11794185779418592
Deletion  Chr12304316630431682
Deletion  Chr4133218601332187212
Deletion  Chr4223753222237795726352
Deletion  Chr615289400152894099LOC_Os06g26130
Deletion  Chr623360931233609354
Deletion  Chr7866397986639812
Deletion  Chr8443265744326647
Deletion  Chr91365200113708000560006
Deletion  Chr9133630011364600028300049

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr218134548181345481

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr13739878438022815LOC_Os01g65510
Inversion  Chr21391689214118293LOC_Os02g24330
Inversion  Chr817348182164570LOC_Os08g03660

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr71048305Chr422375324LOC_Os04g37619
Translocation  Chr71048399Chr422377962LOC_Os04g37630
Translocation  Chr1115066692Chr82164563LOC_Os11g26320