Mutant Information 

Mutant NameFN-5  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 13

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1018043159A-GHomoINTERGENIC
SBS  Chr115844442A-THomoINTERGENIC
SBS  Chr212577755C-THomoINTRON
SBS  Chr212881435C-THomoINTERGENIC
SBS  Chr45462445C-AHomoINTERGENIC
SBS  Chr413054145G-AHomoINTRON
SBS  Chr45462444T-AHomoINTERGENIC
SBS  Chr529385734C-AHomoINTERGENIC
SBS  Chr515260833G-AHomoNON_SYNONYMOUS_CODINGLOC_Os05g26230
SBS  Chr512284337C-GHomoINTERGENIC
SBS  Chr514136993A-GHomoINTERGENIC
SBS  Chr61158031T-AHomoINTERGENIC
SBS  Chr61158035G-THomoINTERGENIC

Deletions: 16

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr119506423195064252
Deletion  Chr117170902171709064
Deletion  Chr142102366421023704
Deletion  Chr1211064302110646333
Deletion  Chr1021954120219541266LOC_Os10g40824
Deletion  Chr112526561825316828512105
Deletion  Chr1113445945134459538LOC_Os11g23770
Deletion  Chr128170255817027621
Deletion  Chr626828102268281042
Deletion  Chr6179271381792715113LOC_Os06g30870
Deletion  Chr7228314862318648935500355
Deletion  Chr71983103219831772740LOC_Os07g33200
Deletion  Chr8212800121880006000011
Deletion  Chr8956115495611562
Deletion  Chr8228329272283296538
Deletion  Chr82006845420068675221LOC_Os08g32400

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr219293462192934622
Insertion  Chr5672048167204811

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr821279882959172
Inversion  Chr821877862499443