Mutant Information 

Mutant NameFN-51  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 38

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr115945349T-AHETINTERGENIC
SBS  Chr130432103G-AHomoINTERGENIC
SBS  Chr1012776476T-AHETINTERGENIC
SBS  Chr106713956G-CHOMOINTERGENIC
SBS  Chr106713956G-CHomoINTERGENIC
SBS  Chr118865337C-THomoINTRON
SBS  Chr118955488C-AHOMOINTERGENIC
SBS  Chr118865337C-THOMOINTRON
SBS  Chr118955488C-AHomoINTERGENIC
SBS  Chr1123206768C-THETINTERGENIC
SBS  Chr1217301324A-GHomoINTERGENIC
SBS  Chr1213374163C-THETINTERGENIC
SBS  Chr1217301324A-GHOMOINTERGENIC
SBS  Chr23658188G-AHOMOINTERGENIC
SBS  Chr235619412G-AHomoINTERGENIC
SBS  Chr23658189G-AHomoINTERGENIC
SBS  Chr23658187T-AHOMOINTERGENIC
SBS  Chr23658187T-AHomoINTERGENIC
SBS  Chr2480339A-THomoINTERGENIC
SBS  Chr23658189G-AHOMOINTERGENIC
SBS  Chr2480339A-THOMOINTERGENIC
SBS  Chr23658188G-AHomoINTERGENIC
SBS  Chr235619412G-AHOMOINTERGENIC
SBS  Chr327655204C-THOMONON_SYNONYMOUS_CODINGLOC_Os03g48490
SBS  Chr327655204C-THomoNON_SYNONYMOUS_CODINGLOC_Os03g48490
SBS  Chr45291051C-AHOMOINTERGENIC
SBS  Chr425493757A-GHETINTERGENIC
SBS  Chr425685738T-AHETINTRON
SBS  Chr45291051C-AHomoINTERGENIC
SBS  Chr522347072C-THomoINTRON
SBS  Chr522347072C-THOMOINTRON
SBS  Chr628984734G-AHomoINTERGENIC
SBS  Chr628984734G-AHOMOINTERGENIC
SBS  Chr818942018C-THomoINTERGENIC
SBS  Chr826614125C-THETNON_SYNONYMOUS_CODINGLOC_Os08g42120
SBS  Chr826614125C-THETNON_SYNONYMOUS_CODINGLOC_Os08g42120
SBS  Chr818942018C-THOMOINTERGENIC
SBS  Chr914372674C-THETINTRON

Deletions: 10

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr11219670342196706026
Deletion  Chr11914153991415467
Deletion  Chr1110780564107805662
Deletion  Chr12204596220459631
Deletion  Chr12516741951674245
Deletion  Chr4631978563197938
Deletion  Chr622262829222628301
Deletion  Chr631085287310852881LOC_Os06g51330
Deletion  Chr6300732693007330435LOC_Os06g49700
Deletion  Chr9619302361930318

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr872465607249028LOC_Os08g12300
Inversion  Chr872465607249028LOC_Os08g12300