Mutant Information 

Mutant NameFN-56  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 21

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr18930690C-THETINTERGENIC
SBS  Chr1019011758C-THETNON_SYNONYMOUS_CODINGLOC_Os10g35550
SBS  Chr1121209623C-AHOMOINTERGENIC
SBS  Chr111761254C-THETINTERGENIC
SBS  Chr127187790C-THETNON_SYNONYMOUS_CODINGLOC_Os12g12970
SBS  Chr417258547T-AHOMOINTERGENIC
SBS  Chr59684862C-THETINTERGENIC
SBS  Chr54137907T-AHETINTRON
SBS  Chr59684861C-THETINTERGENIC
SBS  Chr611997641A-GHETINTERGENIC
SBS  Chr616104569A-THETINTERGENIC
SBS  Chr710096262T-CHETINTERGENIC
SBS  Chr712918380A-THETSYNONYMOUS_CODING
SBS  Chr825321132T-GHETINTERGENIC
SBS  Chr825322829G-AHETNON_SYNONYMOUS_CODINGLOC_Os08g39970
SBS  Chr825321133G-THETINTERGENIC
SBS  Chr823532672C-GHETINTERGENIC
SBS  Chr96839860C-GHOMOINTRON
SBS  Chr97107858T-AHOMOSYNONYMOUS_CODING
SBS  Chr919617827T-GHETNON_SYNONYMOUS_CODINGLOC_Os09g32910
SBS  Chr94291148G-AHOMOSYNONYMOUS_CODING

Deletions: 18

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr118332944183329495LOC_Os01g33260
Deletion  Chr12568642456864284LOC_Os12g10640
Deletion  Chr2897518489751851
Deletion  Chr2228551302285514010
Deletion  Chr331963238319632391
Deletion  Chr327415290274152922
Deletion  Chr3263482852634829914
Deletion  Chr3250069272500695427LOC_Os03g44440
Deletion  Chr423841936238419393
Deletion  Chr422222251222222609
Deletion  Chr475159157516127212
Deletion  Chr517564862175648631
Deletion  Chr520549285205492916LOC_Os05g34650
Deletion  Chr727482388274823946
Deletion  Chr7163099961631001620
Deletion  Chr84439129443913910
Deletion  Chr825311274253112839LOC_Os08g39940
Deletion  Chr96710900671091010

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1022190459221904595LOC_Os10g41290
Insertion  Chr316033737160337372

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr12312148325407724
Inversion  Chr12334260725407743

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr127184589Chr156007632
Translocation  Chr127185242Chr156007722