Mutant Information 

Mutant NameFN-59  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 30

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr12248040T-CHETINTRON
SBS  Chr12248527T-AHETINTRON
SBS  Chr110026306G-AHETSYNONYMOUS_CODING
SBS  Chr121565411A-THETINTERGENIC
SBS  Chr129954040G-AHETINTERGENIC
SBS  Chr138675962T-CHETINTERGENIC
SBS  Chr139728929G-THETINTERGENIC
SBS  Chr139728930A-THETINTERGENIC
SBS  Chr1010222030G-AHETINTERGENIC
SBS  Chr102153313T-AHETINTERGENIC
SBS  Chr1126133938A-CHETINTERGENIC
SBS  Chr1121889197G-AHETINTERGENIC
SBS  Chr1116916812A-GHETINTERGENIC
SBS  Chr1114379728C-AHETINTERGENIC
SBS  Chr119302279C-GHETINTERGENIC
SBS  Chr128168331G-THOMOINTERGENIC
SBS  Chr1211299796T-GHETINTRON
SBS  Chr1211299797C-THETINTRON
SBS  Chr27445903C-THETINTERGENIC
SBS  Chr214502302T-AHETINTERGENIC
SBS  Chr216032612C-THETINTERGENIC
SBS  Chr426293214C-THOMOINTERGENIC
SBS  Chr528910157T-AHETINTRON
SBS  Chr520156906A-CHETINTERGENIC
SBS  Chr614808884T-AHETINTERGENIC
SBS  Chr612683481C-THETINTERGENIC
SBS  Chr75186089C-THETINTERGENIC
SBS  Chr715351954C-THETINTERGENIC
SBS  Chr812885522C-THETINTERGENIC
SBS  Chr91958013C-AHOMOINTRON

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr141310171413101732
Deletion  Chr1087011687012610
Deletion  Chr11567086256708686
Deletion  Chr1121913505219135127LOC_Os11g37120
Deletion  Chr2292987772929878710
Deletion  Chr3549372654937271
Deletion  Chr3181312971813130710LOC_Os03g31730
Deletion  Chr31236700112399000320006
Deletion  Chr4750495375049596
Deletion  Chr434537383345373907LOC_Os04g57980
Deletion  Chr426747131267471409LOC_Os04g45270
Deletion  Chr4340013203400133212LOC_Os04g57050
Deletion  Chr520205256202052571LOC_Os05g34170
Deletion  Chr71750200117538000360007
Deletion  Chr910162636101626371
Deletion  Chr9102426591024271152
Deletion  Chr95686575568658510LOC_Os09g10390

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr423881492238814924
Insertion  Chr432945730329457301
Insertion  Chr719981738199817381
Insertion  Chr83585728358572811

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr31236665613791012LOC_Os03g21664
Inversion  Chr31239934313791015
Inversion  Chr41083197611049639LOC_Os04g19780

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr921765664Chr717543612
Translocation  Chr726239496Chr29272992