Mutant Information 

Mutant NameFN-6  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 6

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr14976663T-CHomoINTERGENIC
SBS  Chr127300309T-AHomoINTRON
SBS  Chr1220408313C-AHomoINTERGENIC
SBS  Chr221078812G-AHomoINTERGENIC
SBS  Chr226128367T-CHomoINTERGENIC
SBS  Chr719653400A-GHomoINTERGENIC

Deletions: 19

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr137982087379820881
Deletion  Chr117687057176870636
Deletion  Chr1144337341443376632
Deletion  Chr1355896263572020313057721
Deletion  Chr10280818828116223434
Deletion  Chr11181700318170052
Deletion  Chr117596076759609115
Deletion  Chr115466794546681319
Deletion  Chr1148839574884345388
Deletion  Chr12750710275071031
Deletion  Chr21346381346391
Deletion  Chr219017024190194582434LOC_Os02g32190
Deletion  Chr223556865235568727
Deletion  Chr3506702850670291
Deletion  Chr320927026209270282LOC_Os03g37736
Deletion  Chr3355539823555399210LOC_Os03g62850
Deletion  Chr426308576263085771
Deletion  Chr7659936865993691
Deletion  Chr915666765156667661

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr17606295760629517

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr11521723618268438LOC_Os01g27260
Inversion  Chr32651157226973882
Inversion  Chr32651256526973891LOC_Os03g46870

Translocations: 8

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr91141010Chr326511575
Translocation  Chr102811614Chr116050711LOC_Os01g28680
Translocation  Chr114884347Chr107992874
Translocation  Chr1211378711Chr1176328942
Translocation  Chr811869989Chr32734877LOC_Os08g19830
Translocation  Chr1022183543Chr47084286
Translocation  Chr628950491Chr1160506892
Translocation  Chr628950499Chr1160504622