Mutant Information 

Mutant NameFN-66  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 28

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr134288142A-CHETINTERGENIC
SBS  Chr1010085587C-THOMOINTERGENIC
SBS  Chr1016769362G-THETINTRON
SBS  Chr1022178807A-GHETINTERGENIC
SBS  Chr1114835925A-THOMOINTRON
SBS  Chr1117938952T-CHOMOINTRON
SBS  Chr1125754712A-GHOMOINTERGENIC
SBS  Chr1213960431C-THETINTERGENIC
SBS  Chr1217036139G-AHOMOINTERGENIC
SBS  Chr1217540369G-THOMOINTERGENIC
SBS  Chr210199560T-AHOMOINTRON
SBS  Chr335198703A-GHETNON_SYNONYMOUS_CODINGLOC_Os03g62120
SBS  Chr48353902C-THOMOINTERGENIC
SBS  Chr410717057C-THOMONON_SYNONYMOUS_CODINGLOC_Os04g19270
SBS  Chr415325223C-AHOMOSTOP_GAINEDLOC_Os04g26290
SBS  Chr419045630C-THOMOINTRON
SBS  Chr422746071A-THOMOINTRON
SBS  Chr524352187G-CHETSYNONYMOUS_CODING
SBS  Chr514444785G-AHETINTERGENIC
SBS  Chr519408095A-CHETINTERGENIC
SBS  Chr627712182T-GHETINTRON
SBS  Chr625778143G-AHOMOINTERGENIC
SBS  Chr620211010G-AHOMOINTERGENIC
SBS  Chr710427829C-THOMOINTERGENIC
SBS  Chr920484284C-THOMOINTERGENIC
SBS  Chr98375445A-GHETINTERGENIC
SBS  Chr96592142A-THOMOINTERGENIC
SBS  Chr94155116C-THOMOINTERGENIC

Deletions: 20

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr125351269253512723
Deletion  Chr110007813100078174
Deletion  Chr1371897003718971515
Deletion  Chr1021355368213553713LOC_Os10g39910
Deletion  Chr112539980325430255304525
Deletion  Chr12244650012475200028700039
Deletion  Chr12102745011027452524
Deletion  Chr221992675220636367096112
Deletion  Chr21196138119614810
Deletion  Chr222794862227948664
Deletion  Chr2174101691741798078113
Deletion  Chr3101908651019088419
Deletion  Chr3122344912234512
Deletion  Chr3342967343429674915
Deletion  Chr3337531943375322026
Deletion  Chr389692789695730
Deletion  Chr411638495116384961LOC_Os04g20749
Deletion  Chr517872225178722316
Deletion  Chr524235700242911815548111
Deletion  Chr6447948944794956

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr6756193175619311

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr111662703617244538
Inversion  Chr22088426021405346LOC_Os02g34830