Mutant Information 

Mutant NameFN-68  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 36

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1539250A-CHETINTRON
SBS  Chr140538050C-THETINTERGENIC
SBS  Chr132256052C-THETINTERGENIC
SBS  Chr124519409G-AHETINTERGENIC
SBS  Chr123532254A-CHOMOINTRON
SBS  Chr13964478A-CHETINTERGENIC
SBS  Chr11638382C-THETSYNONYMOUS_CODING
SBS  Chr107060998T-CHOMOINTRON
SBS  Chr109050846T-AHOMOINTRON
SBS  Chr109246378A-GHOMONON_SYNONYMOUS_CODINGLOC_Os10g18200
SBS  Chr1010419600G-AHETSYNONYMOUS_CODING
SBS  Chr10316036A-THETINTERGENIC
SBS  Chr1110629607G-AHETINTERGENIC
SBS  Chr115539283G-AHETINTERGENIC
SBS  Chr112045432G-AHOMOINTERGENIC
SBS  Chr1110629608T-AHETINTERGENIC
SBS  Chr1116667185T-AHETINTERGENIC
SBS  Chr1121044249C-GHOMOINTERGENIC
SBS  Chr1115739419G-AHOMOINTERGENIC
SBS  Chr1219916548C-THOMONON_SYNONYMOUS_CODINGLOC_Os12g32980
SBS  Chr214429601C-THETINTERGENIC
SBS  Chr217738569G-THOMOINTERGENIC
SBS  Chr312550076T-AHETINTRON
SBS  Chr325802356T-CHETINTRON
SBS  Chr428410166T-CHETINTRON
SBS  Chr431776303A-GHOMOINTERGENIC
SBS  Chr58876354A-THETINTERGENIC
SBS  Chr514944957A-GHETINTERGENIC
SBS  Chr512919962C-THETINTERGENIC
SBS  Chr62582811T-CHETSYNONYMOUS_CODING
SBS  Chr62230685A-THETNON_SYNONYMOUS_CODINGLOC_Os06g05050
SBS  Chr79164338C-THETSYNONYMOUS_CODING
SBS  Chr7456654G-AHOMOINTRON
SBS  Chr826312058T-CHETINTERGENIC
SBS  Chr824435829C-AHOMOINTERGENIC
SBS  Chr85692404C-THETINTERGENIC

Deletions: 32

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1260762226076308LOC_Os01g05500
Deletion  Chr110998687109986903LOC_Os01g19440
Deletion  Chr142589702425897042
Deletion  Chr1197171961971724145LOC_Os01g35630
Deletion  Chr134594393459906467LOC_Os01g07330
Deletion  Chr12021900120255000360007
Deletion  Chr117075118170751268
Deletion  Chr1021403049214030512
Deletion  Chr1120132310201323111
Deletion  Chr1117340079173400812
Deletion  Chr1112613822126138264
Deletion  Chr1118936449189364556
Deletion  Chr1220173966201739704LOC_Os12g33360
Deletion  Chr217030158170301635LOC_Os02g28780
Deletion  Chr219844467198444681
Deletion  Chr215358933153589418
Deletion  Chr216065660160656644
Deletion  Chr336006763360067641LOC_Os03g63770
Deletion  Chr331650732316507342
Deletion  Chr320173235201732427
Deletion  Chr321345021346919
Deletion  Chr42062272062314
Deletion  Chr4284941912849422938LOC_Os04g47912
Deletion  Chr528086061280860643
Deletion  Chr512315693123156996
Deletion  Chr5133366771333671538
Deletion  Chr6309761443097618238LOC_Os06g51200
Deletion  Chr6206005652060057611
Deletion  Chr7957619395761941
Deletion  Chr716389069163890789
Deletion  Chr915931033159310374
Deletion  Chr9585558858555891

Insertions: 28

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr10793772879377281
Insertion  Chr1017886409178864091
Insertion  Chr11486671748667172LOC_Os11g09140
Insertion  Chr11630302963030292
Insertion  Chr1119118308191183082
Insertion  Chr1223521192235211924LOC_Os12g38320
Insertion  Chr1226909980269099803LOC_Os12g43370
Insertion  Chr2489134848913484
Insertion  Chr215314956153149563
Insertion  Chr310674720106747204
Insertion  Chr314895818148958181LOC_Os03g25990
Insertion  Chr325606280256062804
Insertion  Chr325922648259226482
Insertion  Chr326597078265970781
Insertion  Chr43115473311547332
Insertion  Chr410926517109265171
Insertion  Chr420512565205125651
Insertion  Chr546752467529
Insertion  Chr5345095834509582
Insertion  Chr623336427233364272
Insertion  Chr623543748235437483
Insertion  Chr7945795394579532
Insertion  Chr79981329998132912
Insertion  Chr727779155277791554
Insertion  Chr816617982166179824
Insertion  Chr822331732223317326
Insertion  Chr825412077254120772
Insertion  Chr9723064872306482

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr12025522520270036
Inversion  Chr765051306508557LOC_Os07g11770
Inversion  Chr765051426508558LOC_Os07g11770

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr819019894Chr13459890LOC_Os01g07330
Translocation  Chr819019903Chr13459454LOC_Os01g07330