Mutant Information 

Mutant NameFN-69  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 25

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1536104T-AHETINTERGENIC
SBS  Chr17870421C-THETINTERGENIC
SBS  Chr116633458T-AHETINTERGENIC
SBS  Chr105949170G-CHOMONON_SYNONYMOUS_CODINGLOC_Os10g10760
SBS  Chr10711496A-GHETINTERGENIC
SBS  Chr1112750707A-GHETINTRON
SBS  Chr121476770T-GHOMOINTERGENIC
SBS  Chr24203248G-THOMOINTERGENIC
SBS  Chr211995139T-CHOMOINTERGENIC
SBS  Chr215495894C-THOMOUTR_3_PRIME
SBS  Chr320113393C-AHOMOINTERGENIC
SBS  Chr320113392T-CHOMOINTERGENIC
SBS  Chr44886135G-AHETNON_SYNONYMOUS_CODINGLOC_Os04g08832
SBS  Chr47838059T-CHOMOINTERGENIC
SBS  Chr413550754C-THOMOINTRON
SBS  Chr519752515C-THETINTERGENIC
SBS  Chr511078482G-THETINTRON
SBS  Chr614958271T-CHETINTERGENIC
SBS  Chr719044128T-CHOMOINTERGENIC
SBS  Chr79197336A-THOMOINTERGENIC
SBS  Chr719156138C-THOMOINTERGENIC
SBS  Chr88122590C-GHETINTRON
SBS  Chr88561451T-AHETNON_SYNONYMOUS_CODINGLOC_Os08g14290
SBS  Chr88807498C-THETINTERGENIC
SBS  Chr97841936A-GHETINTERGENIC

Deletions: 29

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr131230315312303183LOC_Os01g54280
Deletion  Chr1235538902355389222
Deletion  Chr130588581305885898
Deletion  Chr11251949325195007
Deletion  Chr11109975521099756311
Deletion  Chr230717611307176121
Deletion  Chr324870184248701851
Deletion  Chr330793613307936141
Deletion  Chr322628887226288903LOC_Os03g40700
Deletion  Chr4309648030964811
Deletion  Chr410565342105653486
Deletion  Chr5187062261870625125
Deletion  Chr519464637194646447
Deletion  Chr5203551112035512413
Deletion  Chr6615345861534591
Deletion  Chr62601757426040398228242
Deletion  Chr61598500116011000260004
Deletion  Chr617980349179803556
Deletion  Chr720835543208355452
Deletion  Chr7492730949273101
Deletion  Chr716676218166762246
Deletion  Chr821108916211089171
Deletion  Chr89331001946400013300025
Deletion  Chr89471001998800051700079
Deletion  Chr8108954171089542811
Deletion  Chr810350731103507365
Deletion  Chr917606306176063115
Deletion  Chr92552913255292411
Deletion  Chr95860066586007711

Insertions: 21

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr142852503428525036
Insertion  Chr10163142816314282
Insertion  Chr1011333763113337631LOC_Os10g21950
Insertion  Chr11170937517093751
Insertion  Chr11620333962033394
Insertion  Chr11132263151322631510
Insertion  Chr1123446432234464322
Insertion  Chr1210974998109749986
Insertion  Chr21521358152135818
Insertion  Chr218110886181108863
Insertion  Chr219293462192934622
Insertion  Chr3129301541293015416LOC_Os03g22510
Insertion  Chr325283995252839952
Insertion  Chr434230146342301462
Insertion  Chr516375533163755332
Insertion  Chr519546902195469021
Insertion  Chr610369851103698512
Insertion  Chr7354987335498732
Insertion  Chr7362239936223999
Insertion  Chr84309379430937933
Insertion  Chr818259593182595933

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr467175008552176

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1017399613Chr76046279
Translocation  Chr1017401764Chr76046275