Mutant Information 

Mutant NameFN-75  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 20

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1215172477C-THETINTERGENIC
SBS  Chr227547848G-AHOMOINTERGENIC
SBS  Chr422642831C-THOMOINTERGENIC
SBS  Chr433511067G-AHOMOINTERGENIC
SBS  Chr47420905C-THOMOINTRON
SBS  Chr51614348G-CHETINTERGENIC
SBS  Chr57000523G-CHETINTRON
SBS  Chr59689990T-AHETINTERGENIC
SBS  Chr516823315C-THOMOSYNONYMOUS_CODING
SBS  Chr621733337A-GHETINTRON
SBS  Chr621588246G-THOMOINTERGENIC
SBS  Chr614868735G-AHETINTERGENIC
SBS  Chr721876694A-CHETINTERGENIC
SBS  Chr727989899A-CHOMOINTERGENIC
SBS  Chr727680609A-GHOMOINTERGENIC
SBS  Chr823312672C-THOMOINTERGENIC
SBS  Chr828202685G-THOMOUTR_5_PRIME
SBS  Chr91773557T-CHETINTRON
SBS  Chr99216872A-GHETINTRON
SBS  Chr911676264G-CHOMONON_SYNONYMOUS_CODINGLOC_Os09g19510

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr130315846303158493LOC_Os01g52710
Deletion  Chr1015270081152700832
Deletion  Chr1214910779149107834
Deletion  Chr129989534998954410
Deletion  Chr12107948031079481613
Deletion  Chr1214312355143123561LOC_Os12g24920
Deletion  Chr322980548229805491
Deletion  Chr322980552229805531
Deletion  Chr310718875107188805
Deletion  Chr3101031261010314620
Deletion  Chr3227417552274176510LOC_Os03g40920
Deletion  Chr517711119177111278
Deletion  Chr5411757941175889
Deletion  Chr526964702269647042LOC_Os05g46570
Deletion  Chr723976858239768624
Deletion  Chr9223512102235122010LOC_Os09g38910
Deletion  Chr9222764732227649825LOC_Os09g38768

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr6325593132559312

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr61592126716260637
Inversion  Chr61592965616260646LOC_Os06g28060