Mutant Information 

Mutant NameFN-76  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 31

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr117833819G-THOMOINTERGENIC
SBS  Chr120335370C-THOMOINTERGENIC
SBS  Chr121387470C-THETINTRON
SBS  Chr101102960G-AHOMOINTERGENIC
SBS  Chr112441486C-THOMOINTERGENIC
SBS  Chr112458479A-CHOMOINTERGENIC
SBS  Chr118823172C-THOMOINTERGENIC
SBS  Chr1110971927G-AHETINTERGENIC
SBS  Chr1127238381C-THETINTRON
SBS  Chr124867879G-CHETINTRON
SBS  Chr1210271759G-THOMOINTERGENIC
SBS  Chr1222170139G-THOMOINTERGENIC
SBS  Chr228085258T-CHETINTERGENIC
SBS  Chr28059331A-THOMONON_SYNONYMOUS_CODINGLOC_Os02g14600
SBS  Chr28059332C-THOMOSYNONYMOUS_CODING
SBS  Chr232104422G-AHETINTERGENIC
SBS  Chr322376541G-AHOMOINTRON
SBS  Chr313597665A-CHOMOINTERGENIC
SBS  Chr48097595C-THOMOINTERGENIC
SBS  Chr419777016G-CHOMOINTERGENIC
SBS  Chr416222604A-THOMOINTERGENIC
SBS  Chr434601586A-GHOMOSYNONYMOUS_CODING
SBS  Chr411598263G-AHOMOINTERGENIC
SBS  Chr517678705C-THETINTERGENIC
SBS  Chr515785436A-GHETINTERGENIC
SBS  Chr616196322A-THETINTERGENIC
SBS  Chr66181979C-GHOMOINTERGENIC
SBS  Chr718552720G-AHETINTRON
SBS  Chr7229861T-CHETINTERGENIC
SBS  Chr811503609A-CHETINTERGENIC
SBS  Chr95495450G-THOMONON_SYNONYMOUS_CODINGLOC_Os09g10080

Deletions: 19

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr112874521128745232
Deletion  Chr1111095612110956131
Deletion  Chr1123164943231649441
Deletion  Chr121548501548511
Deletion  Chr224133854241338562LOC_Os02g39910
Deletion  Chr2118728511187286211
Deletion  Chr320808148208081491LOC_Os03g37500
Deletion  Chr435074674350746773LOC_Os04g58960
Deletion  Chr4108363241083633410
Deletion  Chr428851992288519964
Deletion  Chr52219950221997222LOC_Os05g04700
Deletion  Chr520019794200197984
Deletion  Chr6252324982523250810
Deletion  Chr711344846113448526
Deletion  Chr8155910011572300013200018
Deletion  Chr917369080173690833
Deletion  Chr95365001549100012600018
Deletion  Chr95120001535400023400035
Deletion  Chr915840303158403085

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1125148595251485951

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr101295289213531706
Inversion  Chr955961775785805LOC_Os09g10600
Inversion  Chr955961905785802LOC_Os09g10600

Translocations: 5

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr102979982Chr815590118LOC_Os10g05900
Translocation  Chr1012952828Chr718591028LOC_Os07g31380
Translocation  Chr1013531701Chr718549307
Translocation  Chr815590120Chr624834795LOC_Os06g41440
Translocation  Chr815591599Chr624834791LOC_Os06g41440