Mutant Information 

Mutant NameFN-77  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 16

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr122831326G-THETINTERGENIC
SBS  Chr1022371438A-GHETINTERGENIC
SBS  Chr1014232043G-CHETINTERGENIC
SBS  Chr1110592802A-CHETINTRON
SBS  Chr1210258420C-THOMOINTRON
SBS  Chr1221764955T-GHETINTRON
SBS  Chr332680788A-THETINTRON
SBS  Chr418933059G-AHOMOINTERGENIC
SBS  Chr521212124A-GHETINTRON
SBS  Chr515802620C-THOMOINTRON
SBS  Chr721357983T-AHOMOINTERGENIC
SBS  Chr9744923A-GHETINTERGENIC
SBS  Chr922230234C-AHETINTERGENIC
SBS  Chr914353132T-CHOMONON_SYNONYMOUS_CODINGLOC_Os09g24170
SBS  Chr910852116T-GHETINTRON
SBS  Chr913529052G-AHETNON_SYNONYMOUS_CODINGLOC_Os09g22400

Deletions: 16

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr10336003633600382LOC_Os10g06540
Deletion  Chr10186154818615535LOC_Os10g04050
Deletion  Chr11131250481312505810
Deletion  Chr115463521546353615
Deletion  Chr122126300121284000210005
Deletion  Chr296180789649819317416
Deletion  Chr213774747137747503
Deletion  Chr2302085503020856010
Deletion  Chr332210761322107643LOC_Os03g56540
Deletion  Chr32031000120344000340006
Deletion  Chr3363626563636266913
Deletion  Chr525225618252256191LOC_Os05g43380
Deletion  Chr623335731233357321
Deletion  Chr62798567279857710
Deletion  Chr8261200012647600035600060
Deletion  Chr820648292206482931

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr482461108364240LOC_Os04g14690
Inversion  Chr482461108364240LOC_Os04g14870

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr329424069Chr29642974LOC_Os03g51430
Translocation  Chr329424081Chr296447312