Mutant Information 

Mutant NameFN-78  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 28

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr11352843G-AHETINTERGENIC
SBS  Chr111092265C-AHETINTRON
SBS  Chr140133323T-CHETINTRON
SBS  Chr103192187G-THOMOINTERGENIC
SBS  Chr108601386C-THOMOINTERGENIC
SBS  Chr1012427593A-GHOMOINTERGENIC
SBS  Chr1012863644T-CHOMOINTERGENIC
SBS  Chr1015386550G-AHETINTERGENIC
SBS  Chr1018374949G-AHOMOINTERGENIC
SBS  Chr119872727C-THETINTRON
SBS  Chr1117441721A-THETINTRON
SBS  Chr1117441722A-THETINTRON
SBS  Chr1219886620G-AHETINTERGENIC
SBS  Chr1224939277G-THOMOINTRON
SBS  Chr29672633A-CHETNON_SYNONYMOUS_CODINGLOC_Os02g16960
SBS  Chr227088884G-AHOMOINTERGENIC
SBS  Chr331275938T-CHETINTERGENIC
SBS  Chr44458312T-AHETINTRON
SBS  Chr418395644C-THOMOINTERGENIC
SBS  Chr630266550A-THETNON_SYNONYMOUS_CODINGLOC_Os06g49970
SBS  Chr62561219T-AHOMOINTRON
SBS  Chr62561220T-AHOMOINTRON
SBS  Chr624925927G-AHETINTERGENIC
SBS  Chr625573907G-AHETINTRON
SBS  Chr626238325A-GHETINTERGENIC
SBS  Chr77853027G-AHOMONON_SYNONYMOUS_CODINGLOC_Os07g13680
SBS  Chr7301560A-THETINTERGENIC
SBS  Chr82315331T-AHOMOINTERGENIC

Deletions: 18

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr132622707326227125LOC_Os01g56580
Deletion  Chr1303186053031861611
Deletion  Chr11269538742695388814LOC_Os11g44580
Deletion  Chr12211644472116446821
Deletion  Chr121230802012308546526LOC_Os12g21860
Deletion  Chr1224494542488258388044
Deletion  Chr233277403332774085LOC_Os02g54270
Deletion  Chr315979708159797135
Deletion  Chr4213425002134254242LOC_Os04g35114
Deletion  Chr4859680685968082
Deletion  Chr525196716251967171
Deletion  Chr5840938884093924
Deletion  Chr6312149213121494120
Deletion  Chr7136609961366100913LOC_Os07g24100
Deletion  Chr77076239707625112
Deletion  Chr727712086277120871
Deletion  Chr820576875205768805
Deletion  Chr8302677230267819LOC_Os08g05660

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr71953323919582412LOC_Os07g32710

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1212308061Chr1015455929LOC_Os12g21860
Translocation  Chr1212308535Chr1015455911LOC_Os12g21860