Mutant Information 

Mutant NameFN-83  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 27

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1367998G-AHETINTRON
SBS  Chr132952566T-AHETINTERGENIC
SBS  Chr133469984C-GHETNON_SYNONYMOUS_CODINGLOC_Os01g57880
SBS  Chr135007312C-AHETINTERGENIC
SBS  Chr11824637C-THETNON_SYNONYMOUS_CODINGLOC_Os11g02610
SBS  Chr1225337180A-CHETINTERGENIC
SBS  Chr1225553369G-AHETINTERGENIC
SBS  Chr28089368G-AHETINTERGENIC
SBS  Chr336204771A-GHOMONON_SYNONYMOUS_CODINGLOC_Os03g64070
SBS  Chr38881657T-CHETINTERGENIC
SBS  Chr320053998C-THOMOINTRON
SBS  Chr410696376C-THOMOINTERGENIC
SBS  Chr412986524A-CHOMOINTERGENIC
SBS  Chr421472994A-GHOMOUTR_3_PRIME
SBS  Chr432818854G-CHETNON_SYNONYMOUS_CODINGLOC_Os04g55200
SBS  Chr528121022A-GHETINTERGENIC
SBS  Chr613041910A-THOMOUTR_5_PRIME
SBS  Chr619919348C-THETINTERGENIC
SBS  Chr615106760G-AHETNON_SYNONYMOUS_CODINGLOC_Os06g25850
SBS  Chr615644509T-CHOMOSYNONYMOUS_CODING
SBS  Chr72593198C-THOMOINTERGENIC
SBS  Chr718700058T-CHETINTERGENIC
SBS  Chr77668133A-THOMOINTERGENIC
SBS  Chr76530824G-THOMOSTOP_GAINEDLOC_Os07g11800
SBS  Chr76530822C-THOMONON_SYNONYMOUS_CODINGLOC_Os07g11800
SBS  Chr816005574G-AHETINTERGENIC
SBS  Chr813155374G-AHOMOINTRON

Deletions: 13

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr17591909759194738LOC_Os01g13570
Deletion  Chr130843372308433731
Deletion  Chr29119469119559
Deletion  Chr2751611875161191LOC_Os02g13870
Deletion  Chr4265422782654229719
Deletion  Chr4142437981424383840LOC_Os04g24800
Deletion  Chr515747405157474127
Deletion  Chr5637608563760938
Deletion  Chr61390288139032032LOC_Os06g03600
Deletion  Chr72477116224771270108
Deletion  Chr7247324324732463
Deletion  Chr714665018146650213
Deletion  Chr94195001430500011000017

Inversions: 5

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr101420054614506072LOC_Os10g28000
Inversion  Chr101469529914734450LOC_Os10g28320
Inversion  Chr22208420923468457LOC_Os02g36570
Inversion  Chr61242087913377673LOC_Os06g22919
Inversion  Chr91850412019484762

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1014734463Chr941956652
Translocation  Chr918504122Chr34837518LOC_Os03g09260
Translocation  Chr919484759Chr34842285LOC_Os03g09270