Mutant Information 

Mutant NameFN-84  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 26

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1569706A-GHETINTRON
SBS  Chr121934530T-CHOMOINTRON
SBS  Chr115857523G-AHETINTRON
SBS  Chr115043653C-GHOMONON_SYNONYMOUS_CODINGLOC_Os01g27000
SBS  Chr114137934G-AHOMOUTR_3_PRIME
SBS  Chr112928092C-THOMOINTERGENIC
SBS  Chr14833951C-THETINTERGENIC
SBS  Chr1113987184A-GHOMONON_SYNONYMOUS_CODINGLOC_Os11g24530
SBS  Chr1113892669T-CHOMOINTRON
SBS  Chr111399635G-CHOMOINTERGENIC
SBS  Chr1123955425A-THOMOINTERGENIC
SBS  Chr21909558T-GHETINTRON
SBS  Chr218616583T-AHETINTERGENIC
SBS  Chr317693803G-CHETINTERGENIC
SBS  Chr310365414C-AHOMOINTERGENIC
SBS  Chr328402763G-THETINTERGENIC
SBS  Chr328339119T-AHETUTR_3_PRIME
SBS  Chr310365415G-AHOMOINTERGENIC
SBS  Chr430150290A-THETINTERGENIC
SBS  Chr51056345C-THETINTERGENIC
SBS  Chr529895224T-GHETNON_SYNONYMOUS_CODINGLOC_Os05g52070
SBS  Chr5335888A-THETINTERGENIC
SBS  Chr526717834C-THETSYNONYMOUS_CODING
SBS  Chr718427843T-AHOMOINTERGENIC
SBS  Chr825045907T-CHETNON_SYNONYMOUS_CODINGLOC_Os08g39580
SBS  Chr98091698G-AHETINTERGENIC

Deletions: 18

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1154250421542505614
Deletion  Chr133270279332702823
Deletion  Chr10282892728289336
Deletion  Chr10468066246806631
Deletion  Chr10201085742010858915
Deletion  Chr1116339533163395374
Deletion  Chr2120741912074245
Deletion  Chr2262797022627973230
Deletion  Chr2132192361321927438
Deletion  Chr314941124149411284
Deletion  Chr330493138304931413
Deletion  Chr327851705278517061LOC_Os03g48904
Deletion  Chr434914739349147445
Deletion  Chr428230291282303009
Deletion  Chr6882865988286667LOC_Os06g15570
Deletion  Chr621066912210669164LOC_Os06g36050
Deletion  Chr916394874163948751
Deletion  Chr955010015527000260007

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr42556668225702962LOC_Os04g43420