Mutant Information 

Mutant NameFN-85  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 31

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1963605T-AHOMOINTRON
SBS  Chr1963606C-AHOMOINTRON
SBS  Chr111559019C-GHOMOINTERGENIC
SBS  Chr135588866C-AHETINTERGENIC
SBS  Chr135588867G-THETINTERGENIC
SBS  Chr1021133339G-THETINTERGENIC
SBS  Chr1010093538G-AHETINTRON
SBS  Chr104015204T-GHETSYNONYMOUS_CODING
SBS  Chr1224061906G-AHOMOINTRON
SBS  Chr231527534G-THETNON_SYNONYMOUS_CODINGLOC_Os02g51470
SBS  Chr27138409C-AHOMOINTERGENIC
SBS  Chr211531935A-GHOMOINTERGENIC
SBS  Chr220537786G-AHOMOINTRON
SBS  Chr220895932T-CHOMOINTERGENIC
SBS  Chr330377951C-GHETINTERGENIC
SBS  Chr320289323C-GHOMONON_SYNONYMOUS_CODINGLOC_Os03g36590
SBS  Chr36643886C-THETINTERGENIC
SBS  Chr36732395A-THETINTERGENIC
SBS  Chr315900978A-THETINTERGENIC
SBS  Chr317348376G-THOMONON_SYNONYMOUS_CODINGLOC_Os03g30430
SBS  Chr526941968A-GHOMONON_SYNONYMOUS_CODINGLOC_Os05g46510
SBS  Chr5430479G-CHETNON_SYNONYMOUS_CODINGLOC_Os05g01700
SBS  Chr526679461C-THOMOINTERGENIC
SBS  Chr514608006G-AHETINTERGENIC
SBS  Chr520015551A-THETINTERGENIC
SBS  Chr74130870C-GHETINTERGENIC
SBS  Chr75589332G-CHETINTERGENIC
SBS  Chr710449932A-THETNON_SYNONYMOUS_CODINGLOC_Os07g17700
SBS  Chr76419491G-AHETINTERGENIC
SBS  Chr75514883T-CHETNON_SYNONYMOUS_CODINGLOC_Os07g10270
SBS  Chr88303236C-AHETINTRON

Deletions: 13

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1900465890046602LOC_Os01g16000
Deletion  Chr142418110424181144
Deletion  Chr1022654546226545482
Deletion  Chr10226093722609414
Deletion  Chr1014791915147919249
Deletion  Chr2889890688989082
Deletion  Chr234401464344014684
Deletion  Chr321518821215188221
Deletion  Chr3263015626301571
Deletion  Chr411504940115049444
Deletion  Chr5270980502709806010
Deletion  Chr631040616310406171
Deletion  Chr727456069274560789

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr12199469619946963
Insertion  Chr329781945297819455
Insertion  Chr812661233126612331

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr783196528667860LOC_Os07g14580
Inversion  Chr783196528667860LOC_Os07g15110