Mutant Information 

Mutant NameFN-87  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 33

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr133979132G-AHETINTERGENIC
SBS  Chr134999930G-THETINTRON
SBS  Chr135104127G-AHOMOINTERGENIC
SBS  Chr103950501C-THOMOINTERGENIC
SBS  Chr105515955G-AHETINTRON
SBS  Chr117587452G-AHOMOUTR_5_PRIME
SBS  Chr1118139043G-AHOMOINTERGENIC
SBS  Chr121073673A-CHOMOINTRON
SBS  Chr128189728A-THOMOINTERGENIC
SBS  Chr128362675G-AHOMOINTERGENIC
SBS  Chr1211023826C-AHETNON_SYNONYMOUS_CODINGLOC_Os12g18990
SBS  Chr1215879852G-AHETINTERGENIC
SBS  Chr212550116C-THOMONON_SYNONYMOUS_CODINGLOC_Os02g21140
SBS  Chr2475052C-AHOMOINTERGENIC
SBS  Chr33205959T-CHETINTRON
SBS  Chr425903442G-AHOMOINTERGENIC
SBS  Chr423665718G-THOMONON_SYNONYMOUS_CODINGLOC_Os04g39710
SBS  Chr416419312C-THETINTERGENIC
SBS  Chr55533905G-THOMOINTERGENIC
SBS  Chr516446108C-THOMOINTRON
SBS  Chr57728112C-GHETINTERGENIC
SBS  Chr55533906A-THOMOINTERGENIC
SBS  Chr616917794T-AHOMOINTERGENIC
SBS  Chr614631535G-AHOMOINTERGENIC
SBS  Chr610079213A-THETINTERGENIC
SBS  Chr74512643G-AHOMOINTRON
SBS  Chr720743983T-CHETINTRON
SBS  Chr714781917G-THETINTERGENIC
SBS  Chr712817505G-THOMONON_SYNONYMOUS_CODINGLOC_Os07g22720
SBS  Chr76543809A-GHOMOINTERGENIC
SBS  Chr85604104A-CHETINTRON
SBS  Chr820045236G-AHETINTERGENIC
SBS  Chr91198291C-GHETINTERGENIC

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1016061097160610981
Deletion  Chr106206861620687918
Deletion  Chr1225047539250475401LOC_Os12g40480
Deletion  Chr12675592567559349LOC_Os12g12290
Deletion  Chr1223828452238284586
Deletion  Chr22031512031532
Deletion  Chr221432339214323434LOC_Os02g35640
Deletion  Chr335359523353595318
Deletion  Chr4169601001696012828
Deletion  Chr5660285366028541
Deletion  Chr56457681645770827
Deletion  Chr6433206743320681
Deletion  Chr611618042116180431
Deletion  Chr724144354241443551
Deletion  Chr8486505648650582
Deletion  Chr913939342139393431
Deletion  Chr9836124583612483

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr219317487193174871
Insertion  Chr328795290287952902
Insertion  Chr67572557572552

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr795163939907330LOC_Os07g16850
Inversion  Chr795164089907334LOC_Os07g16850