Mutant Information 

Mutant NameFN-88  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 23

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr117988613G-AHETINTERGENIC
SBS  Chr120416318A-GHETINTERGENIC
SBS  Chr129545954G-AHETNON_SYNONYMOUS_CODINGLOC_Os01g51390
SBS  Chr133186961G-AHETNON_SYNONYMOUS_CODINGLOC_Os01g57420
SBS  Chr1014236349G-AHETINTERGENIC
SBS  Chr1116650453G-THETINTRON
SBS  Chr111724715A-GHETSYNONYMOUS_CODING
SBS  Chr1116650454G-THETINTRON
SBS  Chr23959736T-AHETINTERGENIC
SBS  Chr26193169C-THETNON_SYNONYMOUS_CODINGLOC_Os02g11940
SBS  Chr220429547A-GHOMOINTRON
SBS  Chr213134425A-GHETSYNONYMOUS_CODING
SBS  Chr413211517A-CHOMOINTRON
SBS  Chr527395172C-AHETINTERGENIC
SBS  Chr527395174G-AHETINTERGENIC
SBS  Chr520722684T-GHETINTRON
SBS  Chr516225848T-CHOMOINTERGENIC
SBS  Chr62299324T-CHETINTERGENIC
SBS  Chr6353562T-CHETINTERGENIC
SBS  Chr610714253T-GHETNON_SYNONYMOUS_CODINGLOC_Os06g18850
SBS  Chr617200694A-GHOMOINTERGENIC
SBS  Chr620260646A-CHETINTERGENIC
SBS  Chr610279264T-AHETINTERGENIC

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr113284369132843778
Deletion  Chr139697931396979398
Deletion  Chr1256868792568692243
Deletion  Chr1222176653221766541
Deletion  Chr12122510101225102414LOC_Os12g21780
Deletion  Chr2128231491282316112
Deletion  Chr2130673171306735033
Deletion  Chr228084001280930009000LOC_Os02g46090
Deletion  Chr2288210012898900016800025
Deletion  Chr3255075352550754813LOC_Os03g45170
Deletion  Chr4307487730748781
Deletion  Chr4856729185672921
Deletion  Chr41015750101578131LOC_Os04g02680
Deletion  Chr61071416610726356121903
Deletion  Chr8929367892936879
Deletion  Chr8643747464374751
Deletion  Chr9127625421276256725

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr228162977281629772
Insertion  Chr315780243157802432

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr555170365904691

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr610714168Chr2275548862
Translocation  Chr610726342Chr228989774