Mutant Information 

Mutant NameFN-89  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 27

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr14922994A-GHOMOINTERGENIC
SBS  Chr106144718T-AHETINTERGENIC
SBS  Chr105457133G-AHETINTERGENIC
SBS  Chr1110767908G-AHETINTERGENIC
SBS  Chr115583683A-CHOMOINTERGENIC
SBS  Chr121432691G-AHOMOINTERGENIC
SBS  Chr12799130T-GHOMOINTERGENIC
SBS  Chr1220404018G-THETINTERGENIC
SBS  Chr226439742T-AHOMOINTERGENIC
SBS  Chr223645194C-GHOMOINTRON
SBS  Chr219836953T-GHOMOINTERGENIC
SBS  Chr2416977A-THOMONON_SYNONYMOUS_CODINGLOC_Os02g01740
SBS  Chr28846598C-THOMOINTERGENIC
SBS  Chr214702385A-GHOMOINTRON
SBS  Chr326204470T-AHETNON_SYNONYMOUS_CODINGLOC_Os03g46330
SBS  Chr427891391A-GHOMOINTERGENIC
SBS  Chr627897492G-CHOMOINTERGENIC
SBS  Chr625290867T-GHOMOINTERGENIC
SBS  Chr725497657T-AHETINTERGENIC
SBS  Chr726849852G-THETUTR_3_PRIME
SBS  Chr726081753A-GHETINTERGENIC
SBS  Chr720805569A-THOMOINTERGENIC
SBS  Chr720128985A-GHOMOINTERGENIC
SBS  Chr819112087A-THETINTERGENIC
SBS  Chr85479491A-GHOMOINTERGENIC
SBS  Chr815928194T-CHETINTERGENIC
SBS  Chr915980170A-GHOMOINTERGENIC

Deletions: 13

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1640421164042121
Deletion  Chr1023189479231894889LOC_Os10g43040
Deletion  Chr12924264792426481
Deletion  Chr2237915502379156515
Deletion  Chr2893899889389991
Deletion  Chr223010366230103671
Deletion  Chr2292895192928953920LOC_Os02g47880
Deletion  Chr2886690388669041LOC_Os02g15730
Deletion  Chr299970011000300060002
Deletion  Chr32598200126028000460006
Deletion  Chr4627128462712862
Deletion  Chr6161740416174051
Deletion  Chr721268421269511

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr13143348731508170