Mutant Information 

Mutant NameFN-90  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 22

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr18515809G-AHETNON_SYNONYMOUS_CODINGLOC_Os01g15190
SBS  Chr116030508G-CHETNON_SYNONYMOUS_CODINGLOC_Os01g28650
SBS  Chr134392738C-THOMOINTERGENIC
SBS  Chr106595876G-AHETINTERGENIC
SBS  Chr106206814C-THETINTERGENIC
SBS  Chr1124794160C-AHETINTERGENIC
SBS  Chr1122257335G-THETINTERGENIC
SBS  Chr125527722C-THETNON_SYNONYMOUS_CODINGLOC_Os12g10430
SBS  Chr21801938T-AHOMOINTERGENIC
SBS  Chr21801939G-AHOMOINTERGENIC
SBS  Chr22892188G-AHOMOINTERGENIC
SBS  Chr233587762C-THETINTERGENIC
SBS  Chr328060821C-THETINTERGENIC
SBS  Chr3625551C-AHETINTERGENIC
SBS  Chr430201589G-AHETINTERGENIC
SBS  Chr69739661A-GHETINTERGENIC
SBS  Chr714407751C-THETINTRON
SBS  Chr720219423G-AHETINTERGENIC
SBS  Chr718985601C-GHETINTERGENIC
SBS  Chr813663237G-AHETINTERGENIC
SBS  Chr919741221G-AHOMOINTERGENIC
SBS  Chr917181732T-CHETINTERGENIC

Deletions: 7

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr111775300117765000120002
Deletion  Chr2217478121747821
Deletion  Chr426656164266561717LOC_Os04g45050
Deletion  Chr61483184148319511
Deletion  Chr6117762411776295
Deletion  Chr6195424819542502
Deletion  Chr913618745136187461

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr1061472376211106LOC_Os10g11110
Inversion  Chr1061472376211106LOC_Os10g11200
Inversion  Chr72673084227447355LOC_Os07g45990
Inversion  Chr816976871798303LOC_Os08g03780