Mutant Information 

Mutant NameFN-92  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 30

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr19408457C-THOMOINTERGENIC
SBS  Chr142161737C-AHOMOINTERGENIC
SBS  Chr142161736G-CHOMOINTERGENIC
SBS  Chr135662165G-THOMONON_SYNONYMOUS_CODINGLOC_Os01g61640
SBS  Chr133711695G-CHOMOINTERGENIC
SBS  Chr112242074G-CHETINTRON
SBS  Chr19800211A-GHETINTERGENIC
SBS  Chr1011342721C-THOMOSYNONYMOUS_CODING
SBS  Chr10944982T-CHETINTERGENIC
SBS  Chr1113285036A-GHETINTERGENIC
SBS  Chr1120922135C-GHETINTERGENIC
SBS  Chr28879626T-CHOMOINTRON
SBS  Chr32737638C-GHOMOINTERGENIC
SBS  Chr35024961G-AHOMOINTERGENIC
SBS  Chr35442487G-THETNON_SYNONYMOUS_CODINGLOC_Os03g10650
SBS  Chr419273959C-GHETINTERGENIC
SBS  Chr434568658G-AHETINTRON
SBS  Chr427071869C-THETINTERGENIC
SBS  Chr429167214A-GHETINTERGENIC
SBS  Chr430233198G-AHETINTERGENIC
SBS  Chr522158424G-AHETNON_SYNONYMOUS_CODINGLOC_Os05g37820
SBS  Chr63717452G-AHETINTERGENIC
SBS  Chr611728248T-AHETINTRON
SBS  Chr611728249T-AHETINTRON
SBS  Chr69715275T-GHETUTR_3_PRIME
SBS  Chr66506347C-THETINTRON
SBS  Chr729503794A-THETINTRON
SBS  Chr87275862G-THOMONON_SYNONYMOUS_CODINGLOC_Os08g12350
SBS  Chr86696487C-AHOMOINTERGENIC
SBS  Chr99777051G-AHETINTERGENIC

Deletions: 7

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr129311406293114082LOC_Os01g51010
Deletion  Chr11041800110474000560006
Deletion  Chr5130219313021996LOC_Os05g03210
Deletion  Chr610460888104608979
Deletion  Chr717698618176986213LOC_Os07g30030
Deletion  Chr71713200117184000520005
Deletion  Chr82589001280200021300028

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr1143569474701580LOC_Os11g08870
Inversion  Chr62314156023158156LOC_Os06g39010
Inversion  Chr82749021827807626LOC_Os08g44170

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr616554214Chr113458412LOC_Os06g29050
Translocation  Chr616556649Chr113458334LOC_Os06g29050