Mutant Information 

Mutant NameFN-93  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 35

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr111510068C-THETINTERGENIC
SBS  Chr113818533C-AHOMOINTERGENIC
SBS  Chr128262377A-CHOMOINTRON
SBS  Chr136552501G-AHETNON_SYNONYMOUS_CODINGLOC_Os01g63080
SBS  Chr105218310T-AHETINTERGENIC
SBS  Chr108330765A-GHETNON_SYNONYMOUS_CODINGLOC_Os10g16720
SBS  Chr1014522097T-GHETINTERGENIC
SBS  Chr111804713G-AHETINTERGENIC
SBS  Chr1114308436C-AHETINTRON
SBS  Chr1210273956A-GHOMOINTERGENIC
SBS  Chr1220103191T-CHETUTR_3_PRIME
SBS  Chr25708137A-GHOMOINTRON
SBS  Chr23181911G-AHETINTRON
SBS  Chr332346146T-AHOMOINTERGENIC
SBS  Chr311490073A-THETINTERGENIC
SBS  Chr310524744C-THETINTERGENIC
SBS  Chr31038411G-AHETINTERGENIC
SBS  Chr4214370C-THETINTERGENIC
SBS  Chr426869602T-CHOMONON_SYNONYMOUS_CODINGLOC_Os04g45420
SBS  Chr426481919T-CHOMOINTERGENIC
SBS  Chr42056721G-AHETINTERGENIC
SBS  Chr4452834A-THETINTERGENIC
SBS  Chr4214371C-THETINTERGENIC
SBS  Chr513191325C-AHETINTERGENIC
SBS  Chr526904105C-THOMOSYNONYMOUS_CODING
SBS  Chr512140692C-THETNON_SYNONYMOUS_CODINGLOC_Os05g20710
SBS  Chr515495404G-AHETINTRON
SBS  Chr519288184G-AHETINTRON
SBS  Chr526333603T-CHOMOINTERGENIC
SBS  Chr621282764C-THOMOINTERGENIC
SBS  Chr64728958G-AHOMOINTERGENIC
SBS  Chr614493728G-AHOMONON_SYNONYMOUS_CODINGLOC_Os06g24680
SBS  Chr723060607C-THETINTERGENIC
SBS  Chr718912067G-AHETNON_SYNONYMOUS_CODINGLOC_Os07g31830
SBS  Chr919971837A-THETINTRON

Deletions: 20

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr141708643417086529
Deletion  Chr10210920012123200014000022
Deletion  Chr1127649832276498353LOC_Os11g45710
Deletion  Chr1114516047145160536LOC_Os11g25454
Deletion  Chr12478354547835483
Deletion  Chr12879714087971422LOC_Os12g15400
Deletion  Chr2570927657092793
Deletion  Chr234708648347086513
Deletion  Chr317555949175559534
Deletion  Chr318300812183053104498LOC_Os03g32000
Deletion  Chr4408439440843951
Deletion  Chr432059032320590386
Deletion  Chr411447475114474827
Deletion  Chr519389131193891321
Deletion  Chr517650658176506591
Deletion  Chr612532622125326231
Deletion  Chr6239622302396225727
Deletion  Chr725278106252781159LOC_Os07g42234
Deletion  Chr9710212071021244
Deletion  Chr99124677912469518

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr5188339018833901
Insertion  Chr5687734768773474

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr33350678535025452
Inversion  Chr5614688219530273

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr56141650Chr229503039LOC_Os02g48190
Translocation  Chr1013145226Chr23162889