Mutant Information 

Mutant NameFN-98  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 23

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr109070370C-THETINTERGENIC
SBS  Chr1113996374C-AHETINTERGENIC
SBS  Chr1113996373T-CHETINTERGENIC
SBS  Chr1219876000A-CHETINTERGENIC
SBS  Chr121898014C-THOMOINTRON
SBS  Chr2807702G-AHETINTERGENIC
SBS  Chr226247798C-AHOMOINTRON
SBS  Chr28613306T-CHOMOINTERGENIC
SBS  Chr24668547T-CHOMONON_SYNONYMOUS_CODINGLOC_Os02g09100
SBS  Chr327304695T-AHETINTERGENIC
SBS  Chr331439432T-GHOMOINTERGENIC
SBS  Chr433608480G-THETINTERGENIC
SBS  Chr426224387C-THOMOINTRON
SBS  Chr423633406G-AHOMOINTRON
SBS  Chr422585664G-AHOMOINTRON
SBS  Chr414619311C-AHETINTERGENIC
SBS  Chr54092374C-AHOMOINTERGENIC
SBS  Chr54092375A-GHOMOINTERGENIC
SBS  Chr62617627C-THOMOINTRON
SBS  Chr613425171C-THETINTERGENIC
SBS  Chr714148098A-CHETINTERGENIC
SBS  Chr76471877A-THETNON_SYNONYMOUS_CODINGLOC_Os07g11700
SBS  Chr914873798G-AHETSYNONYMOUS_CODING

Deletions: 9

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr2176237591762378021LOC_Os02g29630
Deletion  Chr22236400122409000450005
Deletion  Chr2963981596398161
Deletion  Chr4181483118148321
Deletion  Chr54547539454754910
Deletion  Chr528337106283371082
Deletion  Chr5277807902778081121
Deletion  Chr8578626657862671
Deletion  Chr911268961112689621

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr286070638691680
Inversion  Chr23203083533269057LOC_Os02g52330
Inversion  Chr23203084633269060LOC_Os02g52330