Mutant Information 

Mutant NameFN-99  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 26

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr111949557C-THOMOSYNONYMOUS_CODING
SBS  Chr114816308T-CHOMOINTRON
SBS  Chr118809085G-AHOMOSTOP_GAINEDLOC_Os01g34140
SBS  Chr1017579370G-AHETINTERGENIC
SBS  Chr121317022A-THOMOINTRON
SBS  Chr1225348556C-THETINTERGENIC
SBS  Chr22044212C-AHOMOINTERGENIC
SBS  Chr222560760T-CHOMOINTERGENIC
SBS  Chr314174223C-THETINTERGENIC
SBS  Chr317775673G-AHETINTRON
SBS  Chr335508564G-AHETINTERGENIC
SBS  Chr32133416T-GHETNON_SYNONYMOUS_CODINGLOC_Os03g04570
SBS  Chr44707811C-GHOMOINTERGENIC
SBS  Chr414480879T-CHOMOINTERGENIC
SBS  Chr413564858G-AHOMOINTERGENIC
SBS  Chr44707805C-THOMOINTERGENIC
SBS  Chr43053521C-GHOMONON_SYNONYMOUS_CODINGLOC_Os04g05900
SBS  Chr4599871C-THETINTERGENIC
SBS  Chr4599874T-AHETINTERGENIC
SBS  Chr5818597A-THETINTERGENIC
SBS  Chr56702821C-AHETUTR_5_PRIME
SBS  Chr625334967C-AHOMONON_SYNONYMOUS_CODINGLOC_Os06g42200
SBS  Chr729661266A-CHETINTRON
SBS  Chr814247548C-THOMOINTERGENIC
SBS  Chr82384083T-GHOMOINTRON
SBS  Chr912879580C-THETINTERGENIC

Deletions: 12

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr112714216271422913LOC_Os11g05840
Deletion  Chr1211816573118216395066
Deletion  Chr2569619756997103513LOC_Os02g10770
Deletion  Chr313909439139094456
Deletion  Chr4296242129624309
Deletion  Chr410681475106814761
Deletion  Chr4241258892412589910LOC_Os04g40640
Deletion  Chr56560876560947
Deletion  Chr516723606167236071LOC_Os05g28540
Deletion  Chr515140617151406236LOC_Os05g26040
Deletion  Chr62455033245504916
Deletion  Chr727508960275089611

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1670433267043324

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr112428461Chr815123304LOC_Os08g24946
Translocation  Chr119320583Chr25696198LOC_Os02g10770
Translocation  Chr119320589Chr25699695