Mutant Information 

Mutant NameFN224-S  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 29

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr113676812T-CHOMOINTERGENIC
SBS  Chr126786895A-THETINTRON
SBS  Chr105513896C-THETINTERGENIC
SBS  Chr108029133G-AHETNON_SYNONYMOUS_CODINGLOC_Os10g15250
SBS  Chr1010241115T-GHETINTERGENIC
SBS  Chr1014070486G-AHETINTERGENIC
SBS  Chr1016607758C-AHETINTERGENIC
SBS  Chr1021054394T-AHETINTERGENIC
SBS  Chr1022490247C-AHETNON_SYNONYMOUS_CODINGLOC_Os10g41790
SBS  Chr1122004540C-THETINTRON
SBS  Chr1211677324G-CHETINTERGENIC
SBS  Chr1224260938G-AHOMOINTERGENIC
SBS  Chr1224753030G-AHOMONON_SYNONYMOUS_CODINGLOC_Os12g40030
SBS  Chr211129866G-AHETINTERGENIC
SBS  Chr219243629C-THETINTERGENIC
SBS  Chr35198481C-GHETINTERGENIC
SBS  Chr434416251A-CHETUTR_3_PRIME
SBS  Chr417307069C-THETNON_SYNONYMOUS_CODINGLOC_Os04g29190
SBS  Chr44226861G-THETINTERGENIC
SBS  Chr417307068C-THETNON_SYNONYMOUS_CODINGLOC_Os04g29190
SBS  Chr515379784G-THETINTRON
SBS  Chr54136393C-THETUTR_3_PRIME
SBS  Chr515851552G-THETNON_SYNONYMOUS_CODINGLOC_Os05g27260
SBS  Chr628604747C-GHOMONON_SYNONYMOUS_CODINGLOC_Os06g47170
SBS  Chr79825642G-AHETINTRON
SBS  Chr729382530G-THOMOINTERGENIC
SBS  Chr713699195A-THETINTRON
SBS  Chr811822539G-CHETINTRON
SBS  Chr96188262G-AHOMOINTERGENIC

Deletions: 15

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr113672222136722286LOC_Os01g24270
Deletion  Chr1377698283776985729LOC_Os01g65070
Deletion  Chr1150068815006902
Deletion  Chr134908321349083254
Deletion  Chr2342690533426911158
Deletion  Chr222583631225836376
Deletion  Chr4247439432474395411
Deletion  Chr419759173197591807
Deletion  Chr514209328142093302
Deletion  Chr67729098772911214
Deletion  Chr728819208288192113
Deletion  Chr88402614840263420
Deletion  Chr96183264618328319
Deletion  Chr91125391911263987100682
Deletion  Chr997520011029800054600088

Insertions: 6

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1122142323221423232
Insertion  Chr12261169726116974
Insertion  Chr219353409193534092LOC_Os02g32650
Insertion  Chr228634162286341626
Insertion  Chr333021061330210612
Insertion  Chr335430936354309361

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr101545490915705471LOC_Os10g29720
Inversion  Chr101545490915705471LOC_Os10g30240

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr322899405Chr126523017LOC_Os01g46590