Mutant Information 

Mutant NameFN230-S  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 36

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr110869289C-THETINTERGENIC
SBS  Chr111353995G-AHETINTRON
SBS  Chr116156299A-GHETINTERGENIC
SBS  Chr120715864T-CHOMOINTRON
SBS  Chr122636512G-AHOMOINTRON
SBS  Chr128575831T-CHOMOUTR_3_PRIME
SBS  Chr108230938C-THETINTERGENIC
SBS  Chr101333187C-THETINTERGENIC
SBS  Chr1015429347T-CHETINTRON
SBS  Chr1119414581G-AHETINTERGENIC
SBS  Chr118430313G-AHOMOSYNONYMOUS_CODING
SBS  Chr11186303C-GHETINTERGENIC
SBS  Chr12662554G-AHETINTERGENIC
SBS  Chr1218883405T-AHOMOINTERGENIC
SBS  Chr1218883406C-AHOMOINTERGENIC
SBS  Chr231616971T-AHETINTERGENIC
SBS  Chr27240869C-THETINTERGENIC
SBS  Chr212881435C-THOMOINTERGENIC
SBS  Chr220891847T-CHOMOINTERGENIC
SBS  Chr324047760A-GHETINTERGENIC
SBS  Chr316142902G-AHETINTERGENIC
SBS  Chr32893819G-AHOMOINTERGENIC
SBS  Chr427069993T-CHETINTERGENIC
SBS  Chr41396497A-THETINTERGENIC
SBS  Chr41396496G-THETINTERGENIC
SBS  Chr59274459C-THETINTERGENIC
SBS  Chr52004108C-THOMOINTERGENIC
SBS  Chr56875893T-CHETINTERGENIC
SBS  Chr517558346A-GHETINTERGENIC
SBS  Chr61424003C-AHETSYNONYMOUS_CODING
SBS  Chr618280030T-CHETINTERGENIC
SBS  Chr613803332C-THETINTERGENIC
SBS  Chr611062962T-AHETINTERGENIC
SBS  Chr718516309G-AHOMOINTERGENIC
SBS  Chr7943725A-THOMOINTERGENIC
SBS  Chr716300863G-AHOMOINTERGENIC

Deletions: 25

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1344840523448408028
Deletion  Chr141279530412795388
Deletion  Chr1273069032730693330LOC_Os01g47740
Deletion  Chr1308670133086704835
Deletion  Chr102846280284631232
Deletion  Chr1013195807131958114
Deletion  Chr12188688941886892026
Deletion  Chr124520340452035010
Deletion  Chr12737576173757665
Deletion  Chr2941733294173364
Deletion  Chr232223953322239541
Deletion  Chr2592941859294235
Deletion  Chr224410995244110005LOC_Os02g40330
Deletion  Chr4274932582749328830
Deletion  Chr422188120221881255
Deletion  Chr5823651682365171
Deletion  Chr5772348677234882
Deletion  Chr62625752262576311
Deletion  Chr66721366721426
Deletion  Chr69268859926886910
Deletion  Chr69701658970167214
Deletion  Chr717941359179413601
Deletion  Chr7177875441778756016
Deletion  Chr814054457140544669
Deletion  Chr9225392692253927910LOC_Os09g39220

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr10364473336447332
Insertion  Chr729629256296292562

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr112494602125241627
Inversion  Chr112513948425242292

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1124946029Chr315697602
Translocation  Chr1125139473Chr315697597
Translocation  Chr1125241629Chr108018190LOC_Os10g15270