Mutant Information 

Mutant NameFN230-S  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 36

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr110869289C-THETINTERGENIC
SBS  Chr111353995G-AHETINTRON
SBS  Chr116156299A-GHETINTERGENIC
SBS  Chr120715864T-CHOMOINTRON
SBS  Chr122636512G-AHOMOINTRON
SBS  Chr128575831T-CHOMOUTR_3_PRIME
SBS  Chr108230938C-THETINTERGENIC
SBS  Chr101333187C-THETINTERGENIC
SBS  Chr1015429347T-CHETINTRON
SBS  Chr1119414581G-AHETINTERGENIC
SBS  Chr118430313G-AHOMOSYNONYMOUS_CODING
SBS  Chr11186303C-GHETINTERGENIC
SBS  Chr12662554G-AHETINTERGENIC
SBS  Chr1218883405T-AHOMOINTERGENIC
SBS  Chr1218883406C-AHOMOINTERGENIC
SBS  Chr231616971T-AHETINTERGENIC
SBS  Chr27240869C-THETINTERGENIC
SBS  Chr212881435C-THOMOINTERGENIC
SBS  Chr220891847T-CHOMOINTERGENIC
SBS  Chr324047760A-GHETINTERGENIC
SBS  Chr316142902G-AHETINTERGENIC
SBS  Chr32893819G-AHOMOINTERGENIC
SBS  Chr427069993T-CHETINTERGENIC
SBS  Chr41396497A-THETINTERGENIC
SBS  Chr41396496G-THETINTERGENIC
SBS  Chr59274459C-THETINTERGENIC
SBS  Chr52004108C-THOMOINTERGENIC
SBS  Chr56875893T-CHETINTERGENIC
SBS  Chr517558346A-GHETINTERGENIC
SBS  Chr61424003C-AHETSYNONYMOUS_CODING
SBS  Chr618280030T-CHETINTERGENIC
SBS  Chr613803332C-THETINTERGENIC
SBS  Chr611062962T-AHETINTERGENIC
SBS  Chr718516309G-AHOMOINTERGENIC
SBS  Chr7943725A-THOMOINTERGENIC
SBS  Chr716300863G-AHOMOINTERGENIC

Deletions: 25

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1273069032730693330LOC_Os01g47740
Deletion  Chr1308670133086704835
Deletion  Chr1344840523448408028
Deletion  Chr141279530412795388
Deletion  Chr102846280284631232
Deletion  Chr1013195807131958114
Deletion  Chr12737576173757665
Deletion  Chr12188688941886892026
Deletion  Chr124520340452035010
Deletion  Chr224410995244110005LOC_Os02g40330
Deletion  Chr2941733294173364
Deletion  Chr232223953322239541
Deletion  Chr2592941859294235
Deletion  Chr422188120221881255
Deletion  Chr4274932582749328830
Deletion  Chr5823651682365171
Deletion  Chr5772348677234882
Deletion  Chr66721366721426
Deletion  Chr69268859926886910
Deletion  Chr69701658970167214
Deletion  Chr62625752262576311
Deletion  Chr7177875441778756016
Deletion  Chr717941359179413601
Deletion  Chr814054457140544669
Deletion  Chr9225392692253927910LOC_Os09g39220

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr10364473336447332
Insertion  Chr729629256296292562

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr112494602125241627
Inversion  Chr112513948425242292

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1124946029Chr315697602
Translocation  Chr1125139473Chr315697597
Translocation  Chr1125241629Chr108018190LOC_Os10g15270