Mutant Information 

Mutant NameFN242-S  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 22

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr102484291G-AHOMOINTRON
SBS  Chr101496067A-GHETINTERGENIC
SBS  Chr1117833607G-THETINTERGENIC
SBS  Chr1222228950A-GHETINTERGENIC
SBS  Chr1214980045C-THOMONON_SYNONYMOUS_CODINGLOC_Os12g25830 image
SBS  Chr121795074G-AHETUTR_3_PRIME
SBS  Chr28141526G-AHOMOINTRON
SBS  Chr211402820A-GHOMOINTRON
SBS  Chr233766950T-CHOMOINTERGENIC
SBS  Chr219433089T-CHETINTERGENIC
SBS  Chr211403584C-GHOMONON_SYNONYMOUS_CODINGLOC_Os02g19510 image
SBS  Chr32083930G-CHETINTERGENIC
SBS  Chr46067787C-AHOMONON_SYNONYMOUS_CODINGLOC_Os04g11160 image
SBS  Chr422739386C-THETINTERGENIC
SBS  Chr413844302G-THOMOSYNONYMOUS_CODING
SBS  Chr413844301C-THOMONON_SYNONYMOUS_CODINGLOC_Os04g24190 image
SBS  Chr47451372C-THETNON_SYNONYMOUS_CODINGLOC_Os04g13390 image
SBS  Chr53579783C-THOMOINTERGENIC
SBS  Chr59736845G-CHETINTRON
SBS  Chr714036000T-AHETNON_SYNONYMOUS_CODINGLOC_Os07g24670 image
SBS  Chr71914112A-GHOMOUTR_3_PRIME
SBS  Chr711347787G-THETINTERGENIC

Deletions: 23

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr116529346165293526LOC_Os01g29488 image
Deletion  Chr1556948455694873
Deletion  Chr17799154779916410
Deletion  Chr142150424421504328
Deletion  Chr1781556478155651
Deletion  Chr12251849232518493411LOC_Os12g40680 image
Deletion  Chr121518467151848316
Deletion  Chr12197920111979202918
Deletion  Chr1214772472147724731
Deletion  Chr1223785346237853471
Deletion  Chr21141284811424367115192
Deletion  Chr231208332312083386
Deletion  Chr42102900121074000450004
Deletion  Chr426575001266600008500017
Deletion  Chr41975999119760494503
Deletion  Chr5116890011209400040500060
Deletion  Chr513112363131123652
Deletion  Chr69872543987260562
Deletion  Chr612675751126757543
Deletion  Chr721844642218446431
Deletion  Chr8994307499456172543LOC_Os08g16290 image
Deletion  Chr82244806224482519
Deletion  Chr8211279421127962

Inversions: 6

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr875687719230699
Inversion  Chr882976619230707
Inversion  Chr121764198217685018
Inversion  Chr121764199417685021
Inversion  Chr724665402257781772
Inversion  Chr122614542726442173 image

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr88294523Chr3207219842
Translocation  Chr511687537Chr221279602
Translocation  Chr511689675Chr22127976LOC_Os02g04700 image