Mutant Information 

Mutant NameFN244-S  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 35

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr18467909G-AHETINTERGENIC
SBS  Chr139262332G-AHETINTERGENIC
SBS  Chr139221662T-GHETINTERGENIC
SBS  Chr129026017A-GHOMOINTERGENIC
SBS  Chr124958491G-CHOMOINTERGENIC
SBS  Chr116236597G-AHETNON_SYNONYMOUS_CODINGLOC_Os01g29000
SBS  Chr113709425A-THETINTERGENIC
SBS  Chr102337941A-THETINTERGENIC
SBS  Chr104934277C-AHETINTERGENIC
SBS  Chr107794856G-AHOMOINTERGENIC
SBS  Chr106183740C-GHETINTERGENIC
SBS  Chr117081471A-GHETINTERGENIC
SBS  Chr1124321010C-AHOMOINTERGENIC
SBS  Chr1218793399C-THETINTERGENIC
SBS  Chr25471417C-THETINTRON
SBS  Chr34168990C-THETINTERGENIC
SBS  Chr315822283C-THOMOINTERGENIC
SBS  Chr322034501C-AHOMOINTERGENIC
SBS  Chr4304714G-AHOMONON_SYNONYMOUS_CODINGLOC_Os04g01439
SBS  Chr515602733T-GHETINTERGENIC
SBS  Chr514292249G-CHETSYNONYMOUS_CODING
SBS  Chr520964281A-GHETINTERGENIC
SBS  Chr515602735G-THETINTERGENIC
SBS  Chr520964280T-CHETINTERGENIC
SBS  Chr515602732G-THETINTERGENIC
SBS  Chr526198853G-AHETNON_SYNONYMOUS_CODINGLOC_Os05g45100
SBS  Chr529781798C-THETINTERGENIC
SBS  Chr614017837A-THOMOSYNONYMOUS_CODING
SBS  Chr68570145C-AHETINTERGENIC
SBS  Chr613868968G-THETNON_SYNONYMOUS_CODINGLOC_Os06g23730
SBS  Chr614929312G-AHETINTERGENIC
SBS  Chr622103500G-AHETINTERGENIC
SBS  Chr89931226C-THETINTERGENIC
SBS  Chr8863209T-AHETINTERGENIC
SBS  Chr813298G-THOMOINTRON

Deletions: 24

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr15528656552867216
Deletion  Chr1107599021075992220
Deletion  Chr1394224339422518LOC_Os01g08150
Deletion  Chr1233895362338954711
Deletion  Chr10586588258658897
Deletion  Chr10770371077037155
Deletion  Chr1016071135160711394
Deletion  Chr11176310961763112327
Deletion  Chr1127150495271504972
Deletion  Chr1223554923235549252
Deletion  Chr12248573882485740214LOC_Os12g40160
Deletion  Chr219222109192221145
Deletion  Chr3229606152296063015
Deletion  Chr3572033457203395
Deletion  Chr4318133023181332018
Deletion  Chr420462730204627399LOC_Os04g33780
Deletion  Chr513913215139132227
Deletion  Chr511363885113638883
Deletion  Chr5113566671135667912
Deletion  Chr628410834284108351
Deletion  Chr627369158273691624LOC_Os06g45280
Deletion  Chr62016212769837536213
Deletion  Chr7157400215740053
Deletion  Chr915955234159552362

Insertions: 9

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1114132311413232
Insertion  Chr1198113119811311
Insertion  Chr1274356427435643
Insertion  Chr1123208034232080343
Insertion  Chr231769239317692391
Insertion  Chr420031884200318843
Insertion  Chr58724238724231
Insertion  Chr615361088153610881
Insertion  Chr9669597566959752

Inversions: 7

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr11713630218206821LOC_Os01g31310
Inversion  Chr11713630218206821LOC_Os01g33090
Inversion  Chr11713726218206829LOC_Os01g31320
Inversion  Chr11713726218206829LOC_Os01g33090
Inversion  Chr1169692307083645LOC_Os11g12470
Inversion  Chr1169782927083653
Inversion  Chr52628207227040358LOC_Os05g45280