Mutant Information 

Mutant NameFN276-S  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 24

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr14147436G-AHOMONON_SYNONYMOUS_CODINGLOC_Os01g08430
SBS  Chr123170802C-THETINTERGENIC
SBS  Chr115168726G-CHETINTRON
SBS  Chr115043653C-GHOMONON_SYNONYMOUS_CODINGLOC_Os01g27000
SBS  Chr18815421G-AHOMOINTERGENIC
SBS  Chr14147437T-AHOMONON_SYNONYMOUS_CODINGLOC_Os01g08430
SBS  Chr1010456858G-AHETINTERGENIC
SBS  Chr107638077G-AHETNON_SYNONYMOUS_CODINGLOC_Os10g14040
SBS  Chr105135605G-THOMONON_SYNONYMOUS_CODINGLOC_Os10g09510
SBS  Chr1017182502C-THOMOSYNONYMOUS_CODING
SBS  Chr312785336G-AHETINTERGENIC
SBS  Chr322420635A-THOMOINTERGENIC
SBS  Chr420599982T-CHETINTERGENIC
SBS  Chr412074398A-THETINTERGENIC
SBS  Chr42105767G-AHETINTRON
SBS  Chr51452075A-THETINTERGENIC
SBS  Chr525756704A-THETINTERGENIC
SBS  Chr516046777T-CHETINTERGENIC
SBS  Chr514066268C-THETNON_SYNONYMOUS_CODINGLOC_Os05g24310
SBS  Chr510562448C-THETINTRON
SBS  Chr5714182G-AHETINTRON
SBS  Chr63419113C-THOMOINTERGENIC
SBS  Chr8960494C-THOMOINTERGENIC
SBS  Chr92752698T-CHETINTERGENIC

Deletions: 24

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1521595352159629LOC_Os01g10010
Deletion  Chr135885421358854287LOC_Os01g61990
Deletion  Chr1527053952705412LOC_Os01g10110
Deletion  Chr112823304128233139
Deletion  Chr1187860641878608925
Deletion  Chr14984420498443010
Deletion  Chr1889640888964091
Deletion  Chr1118875367188753692
Deletion  Chr1119887470198874711
Deletion  Chr1210442159104421667
Deletion  Chr121303959130397819
Deletion  Chr21914579191459112LOC_Os02g04340
Deletion  Chr424274926242749271
Deletion  Chr432366443323664441
Deletion  Chr4862660286266108LOC_Os04g15890
Deletion  Chr511440577114405781
Deletion  Chr523047234230472373
Deletion  Chr619615165196151661
Deletion  Chr729194260291942666LOC_Os07g48760
Deletion  Chr813973277139732781LOC_Os08g23170
Deletion  Chr816219395162193983LOC_Os08g26685
Deletion  Chr82648075326480960207
Deletion  Chr922626269226262778
Deletion  Chr9728389472839017

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1504464250446421
Insertion  Chr1119595026195950262
Insertion  Chr217454917174549172LOC_Os02g29380
Insertion  Chr311455771114557711