Mutant Information 

Mutant NameFN282-S  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 25

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr110125726A-THOMOINTERGENIC
SBS  Chr110826360A-GHETSPLICE_SITE_REGION
SBS  Chr139182346C-AHETINTERGENIC
SBS  Chr143140227A-GHOMOINTERGENIC
SBS  Chr1011108174T-AHETINTERGENIC
SBS  Chr126774019C-THOMOINTERGENIC
SBS  Chr121841927A-THETINTERGENIC
SBS  Chr1215436367A-GHOMOINTERGENIC
SBS  Chr223212518T-AHETINTRON
SBS  Chr215191885T-CHETINTERGENIC
SBS  Chr218608200A-THETINTRON
SBS  Chr220526845G-THETNON_SYNONYMOUS_CODINGLOC_Os02g34300
SBS  Chr310113212C-THOMOINTERGENIC
SBS  Chr320862800G-AHOMOINTERGENIC
SBS  Chr42361885C-AHETSYNONYMOUS_CODING
SBS  Chr47279312G-AHOMOINTRON
SBS  Chr520545263C-AHETINTRON
SBS  Chr529886601T-AHOMOINTRON
SBS  Chr524157547C-THOMOINTRON
SBS  Chr629862591C-THETINTERGENIC
SBS  Chr631223968C-THOMOINTRON
SBS  Chr713241783G-AHETINTERGENIC
SBS  Chr723287185A-THETINTERGENIC
SBS  Chr818833211A-THOMOINTERGENIC
SBS  Chr94091276C-THETINTRON

Deletions: 19

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr113547561135475621
Deletion  Chr118379399183794067LOC_Os01g33380
Deletion  Chr1126490011295100030200048
Deletion  Chr1129960011314900015300027
Deletion  Chr1019209924192099284
Deletion  Chr10208672552086726510
Deletion  Chr1011854872118548786LOC_Os10g22810
Deletion  Chr12169734891697350516
Deletion  Chr12726394372639474
Deletion  Chr1229993299963
Deletion  Chr225604822256048231
Deletion  Chr2259584425958484LOC_Os02g05400
Deletion  Chr2338850383388505517
Deletion  Chr3289298242892983612
Deletion  Chr631212312312123186
Deletion  Chr6862245486224595
Deletion  Chr6638623663862371
Deletion  Chr728392723283927241
Deletion  Chr9224085372240855316

Inversions: 6

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr121546338616213937
Inversion  Chr2900086318585672
Inversion  Chr33417377834205714LOC_Os03g60150
Inversion  Chr481654478197980
Inversion  Chr81209361412832108LOC_Os08g20170
Inversion  Chr81209361412832108LOC_Os08g21541

Translocations: 4

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr812102564Chr312152322LOC_Os03g21270
Translocation  Chr812832181Chr3121529452
Translocation  Chr334176672Chr2226917292
Translocation  Chr334207018Chr222691706LOC_Os02g37590