Mutant Information 

Mutant NameFN317-S  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 17

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1014813865G-AHETNON_SYNONYMOUS_CODINGLOC_Os10g28470
SBS  Chr1227221257A-THOMONON_SYNONYMOUS_CODINGLOC_Os12g43850
SBS  Chr121720970C-AHOMONON_SYNONYMOUS_CODINGLOC_Os12g04110
SBS  Chr220932419C-AHOMOINTRON
SBS  Chr220936385C-GHETINTERGENIC
SBS  Chr32505446T-CHETINTERGENIC
SBS  Chr410394394G-AHETNON_SYNONYMOUS_CODINGLOC_Os04g18730
SBS  Chr421580009C-AHETINTRON
SBS  Chr46945052G-THETINTERGENIC
SBS  Chr421580004C-THETINTRON
SBS  Chr420660802A-THETINTERGENIC
SBS  Chr420660800A-GHETINTERGENIC
SBS  Chr526904105C-THOMOSYNONYMOUS_CODING
SBS  Chr527200736T-CHOMOINTERGENIC
SBS  Chr628032019T-CHETINTERGENIC
SBS  Chr77686451T-GHETINTERGENIC
SBS  Chr725374726G-AHETNON_SYNONYMOUS_CODINGLOC_Os07g42400

Deletions: 27

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1170331511703316211
Deletion  Chr110651000106510033
Deletion  Chr126632287266322881LOC_Os01g46750
Deletion  Chr1035777499413463636098
Deletion  Chr1111053143110531441
Deletion  Chr127663677663769
Deletion  Chr1224751245247512472
Deletion  Chr1221891419218914278
Deletion  Chr227075191270751921
Deletion  Chr22043600120447000110002
Deletion  Chr2476491147649176
Deletion  Chr328444713284447218
Deletion  Chr335032123350321252
Deletion  Chr32212700122140000130002
Deletion  Chr47757663775768825
Deletion  Chr426469118264691202
Deletion  Chr413787173137871752
Deletion  Chr4694515369451585
Deletion  Chr626432738264327479
Deletion  Chr6209325452093256015
Deletion  Chr68755176875519519
Deletion  Chr8283912512839126312
Deletion  Chr820764814207648162
Deletion  Chr819345604193456051
Deletion  Chr82095810209582717
Deletion  Chr915154269151542734
Deletion  Chr964880016503000150004

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1223461991234619912
Insertion  Chr336001143360011432

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr52734715829208238
Inversion  Chr52735389629208190LOC_Os05g47750

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr434006564Chr318216865LOC_Os03g31839