Mutant Information 

Mutant NameFN319-S  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 31

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr16997824C-THOMOINTERGENIC
SBS  Chr117894348T-CHOMOINTERGENIC
SBS  Chr134059791G-THETINTRON
SBS  Chr1015348121A-GHOMONON_SYNONYMOUS_CODINGLOC_Os10g29540
SBS  Chr1013190333G-AHOMOINTERGENIC
SBS  Chr1012394707C-AHOMOSYNONYMOUS_CODING
SBS  Chr1111500174C-THETINTERGENIC
SBS  Chr121023176C-THETINTERGENIC
SBS  Chr1222476872G-AHETINTERGENIC
SBS  Chr210764179C-THOMOINTERGENIC
SBS  Chr226024606T-AHOMOINTERGENIC
SBS  Chr225176555C-THOMONON_SYNONYMOUS_CODINGLOC_Os02g41890
SBS  Chr210764178C-THOMOINTERGENIC
SBS  Chr324981623A-GHETNON_SYNONYMOUS_CODINGLOC_Os03g44400
SBS  Chr4149304G-AHOMOINTRON
SBS  Chr413761306G-AHETINTERGENIC
SBS  Chr433358834G-AHETINTERGENIC
SBS  Chr515547316G-AHETINTERGENIC
SBS  Chr56684122G-AHOMOINTRON
SBS  Chr616716694G-AHETSTOP_GAINEDLOC_Os06g29280
SBS  Chr65257785A-GHETINTERGENIC
SBS  Chr65501385T-CHETNON_SYNONYMOUS_CODINGLOC_Os06g10600
SBS  Chr714348653C-THOMONON_SYNONYMOUS_CODINGLOC_Os07g25120
SBS  Chr77909280G-AHETNON_SYNONYMOUS_CODINGLOC_Os07g13800
SBS  Chr78716231A-GHETINTERGENIC
SBS  Chr79325050C-THETSPLICE_SITE_REGION
SBS  Chr728751629A-CHOMOINTERGENIC
SBS  Chr821310522G-THOMOINTERGENIC
SBS  Chr819209840A-THETINTERGENIC
SBS  Chr921717319C-THOMOINTERGENIC
SBS  Chr98330241A-THOMONON_SYNONYMOUS_CODINGLOC_Os09g14070

Deletions: 26

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1357143135714365
Deletion  Chr126588646265886471
Deletion  Chr195310019544000130002
Deletion  Chr112024200120255000130002
Deletion  Chr11911681891168202LOC_Os11g16480
Deletion  Chr116543412654344028LOC_Os11g11790
Deletion  Chr122190933219094613
Deletion  Chr12111281741112820531
Deletion  Chr213605031136050376
Deletion  Chr230568205305682061
Deletion  Chr2230629742306298915LOC_Os02g38130
Deletion  Chr4666708566670861
Deletion  Chr420679554206795606
Deletion  Chr43052300130538000150004
Deletion  Chr513740011392000180003
Deletion  Chr56792262679227917
Deletion  Chr6209331512093317423
Deletion  Chr7202022782020229517
Deletion  Chr721538389215383901
Deletion  Chr7977190897719168
Deletion  Chr718474153184741618
Deletion  Chr818760011914000380005
Deletion  Chr8211096722110968513
Deletion  Chr86741016741032
Deletion  Chr818733503187335041
Deletion  Chr9254617725461781

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr138875578388755782
Insertion  Chr235526121355261212
Insertion  Chr3696777269677721
Insertion  Chr5751831575183151
Insertion  Chr94635644635643

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr58428042Chr123528673LOC_Os05g14820
Translocation  Chr715550475Chr55643362