Mutant Information 

Mutant NameFN337-S  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 32

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr137002457G-AHOMOSYNONYMOUS_CODING
SBS  Chr1015761259A-GHETINTERGENIC
SBS  Chr101895170G-AHOMOINTERGENIC
SBS  Chr1119714826T-AHETINTRON
SBS  Chr1113032440G-AHETINTRON
SBS  Chr121789720C-GHOMOINTERGENIC
SBS  Chr121420273T-CHOMOINTRON
SBS  Chr12312314G-AHETINTERGENIC
SBS  Chr121789721A-GHOMOINTERGENIC
SBS  Chr235569684G-THOMOINTRON
SBS  Chr230326480A-GHETINTRON
SBS  Chr229857595T-AHOMOINTERGENIC
SBS  Chr220101805C-THOMOINTERGENIC
SBS  Chr26494962A-GHETSYNONYMOUS_CODING
SBS  Chr39470125A-GHETINTERGENIC
SBS  Chr32367273A-GHETINTERGENIC
SBS  Chr326108759G-CHETINTRON
SBS  Chr421470500A-THETNON_SYNONYMOUS_CODINGLOC_Os04g35305
SBS  Chr420323978C-THETINTERGENIC
SBS  Chr54794471C-THETINTERGENIC
SBS  Chr630960943C-AHETINTRON
SBS  Chr624180715C-THOMOSYNONYMOUS_CODING
SBS  Chr64058935G-AHETINTERGENIC
SBS  Chr713044831G-AHETINTERGENIC
SBS  Chr718162574G-AHETINTERGENIC
SBS  Chr718013017C-GHETNON_SYNONYMOUS_CODINGLOC_Os07g30430
SBS  Chr799096A-GHETINTERGENIC
SBS  Chr825054498G-AHETINTERGENIC
SBS  Chr87516616T-CHOMOINTERGENIC
SBS  Chr84892650G-CHETINTERGENIC
SBS  Chr84892651T-AHETINTERGENIC
SBS  Chr917107903G-AHETINTERGENIC

Deletions: 21

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr119567187195671903
Deletion  Chr1134480713448103LOC_Os01g03330
Deletion  Chr10164268081642684133LOC_Os10g31320
Deletion  Chr108799769879978314
Deletion  Chr1016415275164152772LOC_Os10g31290
Deletion  Chr1020395129203951301LOC_Os10g38090
Deletion  Chr109261875926190530
Deletion  Chr1128790449287904534
Deletion  Chr11187782341877825723
Deletion  Chr12505585450558551
Deletion  Chr1217984160179841611
Deletion  Chr27852218785222810LOC_Os02g14300
Deletion  Chr21501300115062000490006
Deletion  Chr235569768355697779LOC_Os02g58120
Deletion  Chr2216858722168589725
Deletion  Chr330452767304527681LOC_Os03g53100
Deletion  Chr33657338365734022
Deletion  Chr3133369011333691817LOC_Os03g23070
Deletion  Chr328118313281183163
Deletion  Chr6193811441938115410LOC_Os06g33290
Deletion  Chr826911883269118863LOC_Os08g42580

Insertions: 7

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr10941377794137772LOC_Os10g18560
Insertion  Chr1122223380222233804
Insertion  Chr219427799194277996
Insertion  Chr5238936423893641
Insertion  Chr610367526103675261
Insertion  Chr724289012242890122
Insertion  Chr8921204292120421

Inversions: 5

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr14259596042647554LOC_Os01g73514
Inversion  Chr14259596042647554LOC_Os01g73620
Inversion  Chr101500523615317177LOC_Os10g29490
Inversion  Chr101501175715317176LOC_Os10g28780
Inversion  Chr101501175715317176LOC_Os10g29490