Mutant Information 

Mutant NameFN354-S  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 36

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr19840684G-AHETNON_SYNONYMOUS_CODINGLOC_Os01g17120
SBS  Chr117983547G-AHOMOINTERGENIC
SBS  Chr131264418A-THETINTERGENIC
SBS  Chr133417794C-THETINTRON
SBS  Chr113975465G-THOMOINTERGENIC
SBS  Chr1111642319G-AHOMOSTOP_GAINEDLOC_Os11g20150
SBS  Chr1115171541T-AHETINTRON
SBS  Chr1115285280C-AHETINTRON
SBS  Chr1116020005C-THETINTERGENIC
SBS  Chr1122722070G-THETINTERGENIC
SBS  Chr232035475C-THETINTERGENIC
SBS  Chr217879107A-CHETINTERGENIC
SBS  Chr214394606A-GHETSYNONYMOUS_CODING
SBS  Chr28603412T-CHETINTERGENIC
SBS  Chr35228223T-AHETINTERGENIC
SBS  Chr35228222C-AHETINTERGENIC
SBS  Chr3792414A-THETINTERGENIC
SBS  Chr328804605G-THETINTERGENIC
SBS  Chr328043010G-AHOMOINTERGENIC
SBS  Chr323659694G-AHETINTRON
SBS  Chr323123639G-AHOMOINTERGENIC
SBS  Chr37522578C-THETINTERGENIC
SBS  Chr36728279T-AHETINTERGENIC
SBS  Chr428717881C-THETINTRON
SBS  Chr523712049T-CHETINTERGENIC
SBS  Chr527016406C-THOMOINTERGENIC
SBS  Chr6995520C-THETINTERGENIC
SBS  Chr64483886A-GHETINTRON
SBS  Chr625997931G-AHETINTERGENIC
SBS  Chr710665790G-AHETINTERGENIC
SBS  Chr714742802A-THETNON_SYNONYMOUS_CODINGLOC_Os07g25700
SBS  Chr78767750T-CHETNON_SYNONYMOUS_CODINGLOC_Os07g15210
SBS  Chr826591309C-THOMOINTERGENIC
SBS  Chr817119030G-AHETINTERGENIC
SBS  Chr812324413C-THOMOINTERGENIC
SBS  Chr922214509A-THETINTRON

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr120717393207173941LOC_Os01g37120
Deletion  Chr13564734356475622
Deletion  Chr10213798682137988113
Deletion  Chr113831276383129115LOC_Os11g07570
Deletion  Chr122328097232810811
Deletion  Chr2290694162906944226LOC_Os02g47570
Deletion  Chr263080016349000410008
Deletion  Chr334594279345942823
Deletion  Chr3540313154031376LOC_Os03g10600
Deletion  Chr415219036152190371
Deletion  Chr518699197186992003
Deletion  Chr529417116294171171LOC_Os05g51280
Deletion  Chr514404101144041109LOC_Os05g24860
Deletion  Chr617124468171244757
Deletion  Chr616278910162789122
Deletion  Chr6273753572737536811
Deletion  Chr8214544292145446031LOC_Os08g34220

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr314054766140547661
Insertion  Chr413912052139120523
Insertion  Chr6221629522162952
Insertion  Chr7172449551724495512LOC_Os07g29360

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr120356902268842LOC_Os01g04900
Inversion  Chr11100897015204215LOC_Os11g02920