FN-166 Chr8 23335357 23335382 0 0 Deletion 25 LOC_Os08g36900 alpha-amylase precursor, putative, expressed FN-166 Chr5 16721703 16721714 0 0 Deletion 11 LOC_Os05g28540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-166 Chr2 10070774 10070782 0 0 Deletion 8 LOC_Os02g17490 retrotransposon, putative, centromere-specific, expressed FN-166 Chr2 24795896 24795915 0 0 Deletion 19 LOC_Os02g40920 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-166 Chr3 20594033 20651265 0 0 Deletion 57232 LOC_Os03g37170 expressed protein FN-166 Chr3 20594033 20651265 0 0 Deletion 57232 LOC_Os03g37180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-166 Chr3 20594033 20651265 0 0 Deletion 57232 LOC_Os03g37194 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-166 Chr3 20594033 20651265 0 0 Deletion 57232 LOC_Os03g37210 retrotransposon protein, putative, unclassified, expressed FN-166 Chr3 20594033 20651265 0 0 Deletion 57232 LOC_Os03g37230 retrotransposon protein, putative, unclassified FN-166 Chr3 20594033 20651265 0 0 Deletion 57232 LOC_Os03g37234 retrotransposon, putative, centromere-specific FN-166 Chr3 20594033 20651265 0 0 Deletion 57232 LOC_Os03g37240 retrotransposon protein, putative, unclassified, expressed FN-166 Chr3 20594033 20651265 0 0 Deletion 57232 LOC_Os03g37250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-166 Chr3 20594033 20651265 0 0 Deletion 57232 LOC_Os03g37260 pentatricopeptide, putative, expressed FN-166 Chr9 15232956 15232971 0 0 Deletion 15 FN-166 Chr4 19996839 19996842 0 0 Deletion 3 FN-166 Chr6 16074650 16074652 0 0 Deletion 2 FN-166 Chr3 5856439 5856440 0 0 Deletion 1 FN-166 Chr5 2972100 2972101 0 0 Deletion 1 FN-166 Chr7 25864506 25864507 0 0 Deletion 1 FN-166 Chr7 27170209 27170210 0 0 Deletion 1 FN-166 Chr7 20471081 20471082 0 0 Deletion 1 FN-166 Chr2 23052546 23052548 0 0 Deletion 2 FN-166 Chr4 30703689 30703698 0 0 Deletion 9 FN-166 Chr1 4102146 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr1 5373458 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr1 5373459 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr1 7772821 T-G 0 0 Single Base Substitution 0 INTRON HET FN-166 Chr1 28851140 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-166 Chr1 30246359 C-T 0 0 Single Base Substitution 0 INTRON HET FN-166 Chr2 11582874 C-G 0 0 Single Base Substitution 0 INTRON HET FN-166 Chr2 14580100 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr2 25019661 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr2 25022007 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr2 25022513 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr3 7129959 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN-166 Chr3 14005514 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr4 5718644 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr4 13888214 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-166 Chr4 19217082 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr4 21699147 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr4 27022202 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr4 27441010 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-166 Chr4 30820887 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr5 2973363 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr5 20860796 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-166 Chr5 21098587 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr6 1804152 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr6 13138894 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g22590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-166 Chr6 13245130 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g22760 OsMADS71 - MADS-box family gene with M-alpha type-box, expressed FN-166 Chr6 16172610 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr7 16132610 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr7 21271620 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-166 Chr8 8359394 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g13950 transposon protein, putative, CACTA, En/Spm sub-class FN-166 Chr8 11105353 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN-166 Chr11 6043787 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr11 8922571 G-A 0 0 Single Base Substitution 0 INTRON HET FN-166 Chr11 12995041 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-166 Chr11 14100823 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-166 Chr11 20110782 A-C 0 0 Single Base Substitution 0 INTRON HOMO FN-166 Chr11 20783228 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-166 Chr11 26086243 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr11 26623301 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g44050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-166 Chr12 16320948 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-166 Chr11 22750230 22750230 0 0 Insertion 1 FN-166 Chr1 2074858 2074858 0 0 Insertion 1 LOC_Os01g04630 muconate cycloisomerase, putative, expressed FN-166 Chr6 9246500 9246500 0 0 Insertion 1 FN-166 Chr3 10680794 11346071 0 0 Inversion 665277 FN-166 Chr3 10748835 11346073 0 0 Inversion 597238 LOC_Os03g19170 GCRP7 - Glycine and cysteine rich family protein precursor, expressed FN-166 Chr9 20437346 20500035 0 0 Inversion 62689 LOC_Os09g35570 expressed protein FN-166 Chr9 20437362 20500053 0 0 Inversion 62691 LOC_Os09g35570 expressed protein FN-166 Chr6 6201745 Chr5 24433360 0 Translocation 0