FN-233 Chr7 3761367 3761394 0 0 Deletion 27 LOC_Os07g07540 SHOOT1 protein, putative, expressed FN-233 Chr4 20084839 20084844 0 0 Deletion 5 LOC_Os04g33200 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed FN-233 Chr10 2508084 2508086 0 0 Deletion 2 LOC_Os10g05130 expressed protein FN-233 Chr7 9175667 9175682 0 0 Deletion 15 LOC_Os07g15800 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25270 hypothetical protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25280 retrotransposon protein, putative, unclassified, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25290 expressed protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25300 transposon protein, putative, unclassified, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25310 hypothetical protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25320 expressed protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25330 transposon protein, putative, unclassified, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25350 expressed protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25360 tRNA methyltransferase complex GCD14 subunit, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25370 cytokinin-O-glucosyltransferase 2, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25380 cytokinin-O-glucosyltransferase 2, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25400 uncharacterized protein all1601, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25410 pentatricopeptide repeat domain containing protein, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25420 expressed protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25430 hypothetical protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25440 cytokinin-O-glucosyltransferase 2, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25454 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25470 retrotransposon protein, putative, unclassified, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25480 retrotransposon protein, putative, unclassified FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25490 cytokinin-O-glucosyltransferase 2, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25499 hypothetical protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25510 hypothetical protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25520 transposon protein, putative, unclassified, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25540 ribosomal protein L27, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25550 FACT complex subunit SPT16, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25560 OsSCP23 - Putative Serine Carboxypeptidase homologue, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25570 protein phosphatase 2C, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25580 hypothetical protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25590 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25600 retrotransposon protein, putative, unclassified, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25610 retrotransposon protein, putative, unclassified, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25620 transposon protein, putative, CACTA, En/Spm sub-class FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25630 transposon protein, putative, CACTA, En/Spm sub-class FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25640 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25650 cysteine-rich receptor-like protein kinase, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25660 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25670 expressed protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25680 ulp1 protease family, C-terminal catalytic domain containing protein, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25700 hypothetical protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25720 expressed protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25730 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25740 expressed protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25750 retrotransposon protein, putative, unclassified FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25760 retrotransposon protein, putative, unclassified FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25770 retrotransposon protein, putative, unclassified FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25780 retrotransposon protein, putative, unclassified, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25784 expressed protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25790 expressed protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25800 cytokinin-O-glucosyltransferase 2, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25810 retrotransposon protein, putative, unclassified FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25820 glycosyltransferase, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25830 expressed protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25840 OsFBX128 - F-box domain containing protein, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25860 hypothetical protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25870 OsMADS84 - MADS-box family gene with M-gamma type-box, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25880 retrotransposon protein, putative, unclassified, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25890 retrotransposon protein, putative, unclassified, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25900 go35 NBS-LRR, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25910 hypothetical protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25920 OsMADS85 - MADS-box family gene with M-gamma type-box, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25930 OsMADS99 - MADS-box family gene with M-gamma type-box FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25950 retrotransposon protein, putative, unclassified, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25960 expressed protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25970 cytokinin-O-glucosyltransferase 2, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25980 cytokinin-O-glucosyltransferase 2, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g25990 tRNA methyltransferase complex GCD14 subunit, putative, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g26000 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g26010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g26020 transposon protein, putative, CACTA, En/Spm sub-class FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g26030 retrotransposon protein, putative, unclassified FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g26040 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g26050 hypothetical protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g26060 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g26070 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g26080 hypothetical protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g26090 expressed protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g26100 hypothetical protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g26110 hypothetical protein FN-233 Chr4 14599828 15221926 0 0 Deletion 622098 LOC_Os04g26120 TNP1, putative, expressed FN-233 Chr7 13238001 13282000 0 0 Deletion 44000 LOC_Os07g23450 ZOS7-04 - C2H2 zinc finger protein, expressed FN-233 Chr7 13238001 13282000 0 0 Deletion 44000 LOC_Os07g23460 retrotransposon protein, putative, Ty1-copia subclass, expressed FN-233 Chr7 13238001 13282000 0 0 Deletion 44000 LOC_Os07g23470 thaumatin, putative, expressed FN-233 Chr7 13238001 13282000 0 0 Deletion 44000 LOC_Os07g23480 retrotransposon protein, putative, unclassified, expressed FN-233 Chr7 13238001 13282000 0 0 Deletion 44000 LOC_Os07g23485 expressed protein FN-233 Chr7 13238001 13282000 0 0 Deletion 44000 LOC_Os07g23494 expressed protein FN-233 Chr1 5605617 5605638 0 0 Deletion 21 FN-233 Chr2 20347446 20347457 0 0 Deletion 11 FN-233 Chr7 24679630 24679635 0 0 Deletion 5 FN-233 Chr6 24615709 24615713 0 0 Deletion 4 FN-233 Chr9 8040249 8040253 0 0 Deletion 4 FN-233 Chr4 29513276 29513278 0 0 Deletion 2 FN-233 Chr2 17760970 17760971 0 0 Deletion 1 FN-233 Chr3 10737671 10737672 0 0 Deletion 1 FN-233 Chr10 19977467 19977468 0 0 Deletion 1 FN-233 Chr12 22517400 22517401 0 0 Deletion 1 FN-233 Chr4 24218852 24218853 0 0 Deletion 1 FN-233 Chr5 17304217 17304218 0 0 Deletion 1 FN-233 Chr7 12371335 12371336 0 0 Deletion 1 FN-233 Chr7 19247912 19247913 0 0 Deletion 1 FN-233 Chr12 27133543 27133546 0 0 Deletion 3 FN-233 Chr1 99911 99915 0 0 Deletion 4 FN-233 Chr1 17178511 17178515 0 0 Deletion 4 FN-233 Chr12 14898435 14898440 0 0 Deletion 5 FN-233 Chr8 13416213 13416236 0 0 Deletion 23 FN-233 Chr9 5091838 5092199 0 0 Deletion 361 FN-233 Chr1 22499516 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g39890 transposon protein, putative, unclassified, expressed FN-233 Chr1 25479488 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g44430 retrotransposon protein, putative, unclassified, expressed FN-233 Chr2 11326622 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-233 Chr2 26963475 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN-233 Chr2 33171085 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN-233 Chr3 5233356 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g10270 conserved hypothetical protein FN-233 Chr3 32973945 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-233 Chr4 17688251 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g29700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-233 Chr4 26353955 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-233 Chr4 33207888 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-233 Chr4 33542829 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN-233 Chr6 3475228 A-T 0 0 Single Base Substitution 0 INTRON HET FN-233 Chr6 22871045 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g38600 expressed protein FN-233 Chr7 5063267 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-233 Chr7 27704388 G-A 0 0 Single Base Substitution 0 INTRON HET FN-233 Chr8 18791528 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-233 Chr8 21178789 C-T 0 0 Single Base Substitution 0 INTRON HET FN-233 Chr10 21186833 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-233 Chr11 10912485 C-T 0 0 Single Base Substitution 0 INTRON HET FN-233 Chr11 13323425 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-233 Chr11 16018000 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-233 Chr12 10968642 A-T 0 0 Single Base Substitution 0 INTRON HET FN-233 Chr12 12396980 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-233 Chr12 20037888 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-233 Chr12 22141428 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-233 Chr12 25331134 C-A 0 0 Single Base Substitution 0 INTRON HET FN-233 Chr9 342074 342074 0 0 Insertion 31 FN-233 Chr7 1568078 1568078 0 0 Insertion 29 FN-233 Chr10 2738516 2738516 0 0 Insertion 16 FN-233 Chr1 27633653 27633653 0 0 Insertion 14 FN-233 Chr5 14386870 14386870 0 0 Insertion 12 FN-233 Chr6 2942475 2942475 0 0 Insertion 10 FN-233 Chr1 11598414 11598414 0 0 Insertion 9 FN-233 Chr12 10974998 10974998 0 0 Insertion 6 FN-233 Chr12 25463863 25463863 0 0 Insertion 4 FN-233 Chr4 16632299 16632299 0 0 Insertion 4 FN-233 Chr5 21765747 21765747 0 0 Insertion 4 FN-233 Chr6 23632293 23632293 0 0 Insertion 4 FN-233 Chr8 11623803 11623803 0 0 Insertion 4 FN-233 Chr5 5047071 5047071 0 0 Insertion 3 FN-233 Chr1 11052183 11052183 0 0 Insertion 2 FN-233 Chr1 23798371 23798371 0 0 Insertion 2 FN-233 Chr10 2189216 2189216 0 0 Insertion 2 FN-233 Chr10 22061707 22061707 0 0 Insertion 2 FN-233 Chr11 1623145 1623145 0 0 Insertion 2 FN-233 Chr2 21772174 21772174 0 0 Insertion 2 FN-233 Chr3 22634780 22634780 0 0 Insertion 2 FN-233 Chr4 312993 312993 0 0 Insertion 2 FN-233 Chr4 21130579 21130579 0 0 Insertion 2 FN-233 Chr5 7365322 7365322 0 0 Insertion 2 FN-233 Chr7 27782212 27782212 0 0 Insertion 2 FN-233 Chr8 10101762 10101762 0 0 Insertion 2 FN-233 Chr8 10173562 10173562 0 0 Insertion 2 FN-233 Chr1 38264827 38264827 0 0 Insertion 1 FN-233 Chr4 29504626 29504626 0 0 Insertion 1 FN-233 Chr7 18932575 18932575 0 0 Insertion 1 FN-233 Chr8 4203146 4203146 0 0 Insertion 1 FN-233 Chr6 5740593 5750427 0 0 Inversion 9834