FN-408 Chr4 32384562 32384570 0 0 Deletion 8 LOC_Os04g54430 immediate-early protein RSP40, putative, expressed FN-408 Chr7 2506477 2506485 0 0 Deletion 8 LOC_Os07g05440 retrotransposon protein, putative, unclassified, expressed FN-408 Chr1 1081427 1081431 0 0 Deletion 4 LOC_Os01g02930 glycosyltransferase protein, putative, expressed FN-408 Chr5 885567 885576 0 0 Deletion 9 LOC_Os05g02550 F-box domain containing protein, expressed FN-408 Chr6 7044498 7044507 0 0 Deletion 9 LOC_Os06g12870 leaf senescence related protein, putative, expressed FN-408 Chr8 15166455 15166467 0 0 Deletion 12 LOC_Os08g25010 TBC domain containing protein, expressed FN-408 Chr8 25917388 25917409 0 0 Deletion 21 LOC_Os08g40960 retrotransposon protein, putative, unclassified, expressed FN-408 Chr7 18612145 18612186 0 0 Deletion 41 LOC_Os07g31420 transposon protein, putative, unclassified, expressed FN-408 Chr6 10138541 10138817 0 0 Deletion 276 LOC_Os06g17480 histone-like transcription factor and archaeal histone, putative, expressed FN-408 Chr4 14651648 14651655 0 0 Deletion 7 FN-408 Chr10 654079 654083 0 0 Deletion 4 FN-408 Chr11 129608 129612 0 0 Deletion 4 FN-408 Chr1 33780725 33780728 0 0 Deletion 3 FN-408 Chr3 24467377 24467378 0 0 Deletion 1 FN-408 Chr5 6688065 6688066 0 0 Deletion 1 FN-408 Chr6 116856 116857 0 0 Deletion 1 FN-408 Chr8 12384201 12384202 0 0 Deletion 1 FN-408 Chr11 19056033 19056034 0 0 Deletion 1 FN-408 Chr12 4835806 4835807 0 0 Deletion 1 FN-408 Chr4 7877144 7877145 0 0 Deletion 1 FN-408 Chr4 27534991 27534992 0 0 Deletion 1 FN-408 Chr2 14102905 14102907 0 0 Deletion 2 FN-408 Chr5 21346654 21346657 0 0 Deletion 3 FN-408 Chr3 28591493 28591497 0 0 Deletion 4 FN-408 Chr12 27163347 27163354 0 0 Deletion 7 FN-408 Chr12 26189110 26189118 0 0 Deletion 8 FN-408 Chr4 4258346 4258365 0 0 Deletion 19 FN-408 Chr6 29041017 29041046 0 0 Deletion 29 FN-408 Chr9 10079654 10079809 0 0 Deletion 155 FN-408 Chr9 10079655 10079810 0 0 Deletion 155 FN-408 Chr1 1857998 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g04210 DNA binding protein, putative, expressed FN-408 Chr1 2015679 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN-408 Chr1 2590346 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN-408 Chr1 11422319 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-408 Chr1 15963419 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-408 Chr1 36824979 A-T 0 0 Single Base Substitution 0 INTRON HET FN-408 Chr2 390926 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-408 Chr2 1521477 C-A 0 0 Single Base Substitution 0 INTRON HET FN-408 Chr2 28149650 A-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN-408 Chr2 30178052 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g49390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-408 Chr3 9065515 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g16430 RNA polymerase sigma factor, putative, expressed FN-408 Chr3 9065516 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g16430 RNA polymerase sigma factor, putative, expressed FN-408 Chr3 33577503 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-408 Chr4 12497324 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-408 Chr4 19045427 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN-408 Chr5 14963875 T-A 0 0 Single Base Substitution 0 STOP_LOST HET LOC_Os05g25720 retrotransposon protein, putative, unclassified, expressed FN-408 Chr5 18226647 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-408 Chr5 29004962 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os05g50600 OsSCP31 - Putative Serine Carboxypeptidase homologue, expressed FN-408 Chr6 29767541 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-408 Chr6 29771109 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN-408 Chr6 29771111 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN-408 Chr7 2185581 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-408 Chr7 2530624 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-408 Chr7 15942843 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-408 Chr8 19895117 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-408 Chr8 19895118 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-408 Chr9 6751112 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-408 Chr10 12001228 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-408 Chr12 8063608 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-408 Chr12 13896077 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN-408 Chr12 25417515 G-C 0 0 Single Base Substitution 0 INTRON HOMO FN-408 Chr10 14175586 14175586 0 0 Insertion 2 FN-408 Chr12 9977598 9977598 0 0 Insertion 11 FN-408 Chr1 11584081 11584081 0 0 Insertion 8 FN-408 Chr5 22078777 22078777 0 0 Insertion 6 FN-408 Chr8 26353245 26353245 0 0 Insertion 6 FN-408 Chr1 6154084 6154084 0 0 Insertion 4 FN-408 Chr1 23745436 23745436 0 0 Insertion 4 FN-408 Chr11 4818876 4818876 0 0 Insertion 4 FN-408 Chr11 28281687 28281687 0 0 Insertion 4 FN-408 Chr4 34730832 34730832 0 0 Insertion 4 FN-408 Chr5 6402287 6402287 0 0 Insertion 4 FN-408 Chr11 23208034 23208034 0 0 Insertion 3 FN-408 Chr4 17630012 17630012 0 0 Insertion 3 FN-408 Chr7 24934517 24934517 0 0 Insertion 3 LOC_Os07g41600 proline-rich protein, putative, expressed FN-408 Chr1 3341686 3341686 0 0 Insertion 2 FN-408 Chr1 23494213 23494213 0 0 Insertion 2 FN-408 Chr10 3986710 3986710 0 0 Insertion 2 FN-408 Chr11 16919102 16919102 0 0 Insertion 2 FN-408 Chr12 9349145 9349145 0 0 Insertion 2 FN-408 Chr2 16516655 16516655 0 0 Insertion 2 FN-408 Chr2 16607553 16607553 0 0 Insertion 2 FN-408 Chr2 18534196 18534196 0 0 Insertion 2 FN-408 Chr2 26650879 26650879 0 0 Insertion 2 FN-408 Chr3 7620255 7620255 0 0 Insertion 2 FN-408 Chr3 16732248 16732248 0 0 Insertion 2 FN-408 Chr3 25283995 25283995 0 0 Insertion 2 FN-408 Chr5 7120260 7120260 0 0 Insertion 2 FN-408 Chr8 3638362 3638362 0 0 Insertion 2 FN-408 Chr8 8336123 8336123 0 0 Insertion 2 FN-408 Chr8 18164358 18164358 0 0 Insertion 2 FN-408 Chr9 18750952 18750952 0 0 Insertion 2 FN-408 Chr11 23454869 23454869 0 0 Insertion 1 FN-408 Chr2 23138618 23138618 0 0 Insertion 1 FN-408 Chr6 25066086 25066086 0 0 Insertion 1 FN-408 Chr7 9078140 9078140 0 0 Insertion 1 FN-408 Chr7 9965619 9965619 0 0 Insertion 1 FN-408 Chr7 20230947 20230947 0 0 Insertion 1 FN-408 Chr1 37519374 37725591 0 0 Inversion 206217 LOC_Os01g64990 GPI transamidase subunit PIG-U domain containing protein, expressed FN-408 Chr5 1547562 1686493 0 0 Inversion 138931 LOC_Os05g03620 TKL_IRAK_CR4L.4 - The CR4L subfamily has homology with Crinkly4, expressed FN-408 Chr7 13586659 14559752 0 0 Inversion 973093