FN1657-S Chr1 37381723 37381724 0 0 Deletion 1 LOC_Os01g64410 ATOFP18/OFP18, putative, expressed FN1657-S Chr12 10579475 10579477 0 0 Deletion 2 LOC_Os12g18330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1657-S Chr5 4780343 4780346 0 0 Deletion 3 LOC_Os05g08720 retrotransposon protein, putative, unclassified, expressed FN1657-S Chr8 5843854 5843859 0 0 Deletion 5 LOC_Os08g10070 protein kinase, putative, expressed FN1657-S Chr10 6510187 6510203 0 0 Deletion 16 LOC_Os10g11750 LTPL89 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN1657-S Chr8 4718348 4718359 0 0 Deletion 11 LOC_Os08g08250 expressed protein FN1657-S Chr11 11816089 11816094 0 0 Deletion 5 LOC_Os11g20420 retrotransposon protein, putative, unclassified, expressed FN1657-S Chr1 43031522 43031523 0 0 Deletion 1 LOC_Os01g74260 retrotransposon protein, putative, unclassified, expressed FN1657-S Chr3 19884001 19917000 0 0 Deletion 33000 LOC_Os03g35860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1657-S Chr3 19884001 19917000 0 0 Deletion 33000 LOC_Os03g35870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1657-S Chr3 19884001 19917000 0 0 Deletion 33000 LOC_Os03g35880 expressed protein FN1657-S Chr3 19884001 19917000 0 0 Deletion 33000 LOC_Os03g35886 expressed protein FN1657-S Chr3 19884001 19917000 0 0 Deletion 33000 LOC_Os03g35894 retrotransposon, putative, centromere-specific, expressed FN1657-S Chr10 4103001 4191000 0 0 Deletion 88000 LOC_Os10g07608 retrotransposon protein, putative, unclassified, expressed FN1657-S Chr10 4103001 4191000 0 0 Deletion 88000 LOC_Os10g07606 hypothetical protein FN1657-S Chr10 4103001 4191000 0 0 Deletion 88000 LOC_Os10g07602 expressed protein FN1657-S Chr10 4103001 4191000 0 0 Deletion 88000 LOC_Os10g07598 retrotransposon protein, putative, unclassified, expressed FN1657-S Chr10 4103001 4191000 0 0 Deletion 88000 LOC_Os10g07596 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1657-S Chr10 4103001 4191000 0 0 Deletion 88000 LOC_Os10g07594 retrotransposon protein, putative, unclassified, expressed FN1657-S Chr10 4103001 4191000 0 0 Deletion 88000 LOC_Os10g07604 expressed protein FN1657-S Chr10 4103001 4191000 0 0 Deletion 88000 LOC_Os10g07584 retrotransposon protein, putative, unclassified, expressed FN1657-S Chr10 4103001 4191000 0 0 Deletion 88000 LOC_Os10g07582 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1657-S Chr10 4103001 4191000 0 0 Deletion 88000 LOC_Os10g07578 retrotransposon protein, putative, unclassified, expressed FN1657-S Chr2 14374643 14374646 0 0 Deletion 3 FN1657-S Chr5 29594295 29594299 0 0 Deletion 4 FN1657-S Chr12 9238951 9238955 0 0 Deletion 4 FN1657-S Chr2 34164920 34164925 0 0 Deletion 5 FN1657-S Chr10 1097680 1097688 0 0 Deletion 8 FN1657-S Chr11 2091754 2091763 0 0 Deletion 9 FN1657-S Chr6 8779996 8780008 0 0 Deletion 12 FN1657-S Chr6 12451735 12451747 0 0 Deletion 12 FN1657-S Chr12 7588384 7588545 0 0 Deletion 161 FN1657-S Chr2 6850813 6850836 0 0 Deletion 23 FN1657-S Chr7 19130278 19130300 0 0 Deletion 22 FN1657-S Chr10 6226775 6226792 0 0 Deletion 17 FN1657-S Chr3 26556621 26556635 0 0 Deletion 14 FN1657-S Chr9 19234642 19234655 0 0 Deletion 13 FN1657-S Chr3 20579976 20579988 0 0 Deletion 12 FN1657-S Chr12 11764527 11764538 0 0 Deletion 11 FN1657-S Chr4 21904768 21904776 0 0 Deletion 8 FN1657-S Chr4 9832108 9832112 0 0 Deletion 4 FN1657-S Chr7 25935551 25935554 0 0 Deletion 3 FN1657-S Chr4 7112959 7112961 0 0 Deletion 2 FN1657-S Chr12 20980969 20980971 0 0 Deletion 2 FN1657-S Chr2 19962404 19962405 0 0 Deletion 1 FN1657-S Chr3 13683886 13683887 0 0 Deletion 1 FN1657-S Chr6 10329237 10329238 0 0 Deletion 1 FN1657-S Chr8 6942174 6942175 0 0 Deletion 1 FN1657-S Chr11 14265367 14265368 0 0 Deletion 1 FN1657-S Chr1 9574459 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1657-S Chr2 12827055 G-A 0 0 Single Base Substitution 0 INTRON Homo FN1657-S Chr2 32398023 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1657-S Chr3 5349378 T-C 0 0 Single Base Substitution 0 INTRON HET FN1657-S Chr3 6806510 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1657-S Chr3 17197108 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1657-S Chr3 20912052 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1657-S Chr3 29419488 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1657-S Chr4 32368263 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g54400 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed FN1657-S Chr5 12600206 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1657-S Chr5 13268651 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1657-S Chr6 15358021 C-A 0 0 Single Base Substitution 0 INTRON HET FN1657-S Chr6 31094991 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1657-S Chr7 6890549 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1657-S Chr7 21709894 A-C 0 0 Single Base Substitution 0 INTRON Homo FN1657-S Chr8 8495175 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1657-S Chr8 23046442 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1657-S Chr8 26937449 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1657-S Chr8 28181135 C-A 0 0 Single Base Substitution 0 INTRON HET FN1657-S Chr9 15661595 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1657-S Chr9 16361268 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1657-S Chr11 12945143 C-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os11g22530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1657-S Chr11 13929152 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1657-S Chr11 15126081 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1657-S Chr11 15342707 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1657-S Chr12 15943162 T-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1657-S Chr8 18413261 18413261 0 0 Insertion 2 FN1657-S Chr2 34109073 34109073 0 0 Insertion 1 LOC_Os02g55698 expressed protein FN1657-S Chr10 22436907 22436907 0 0 Insertion 1 FN1657-S Chr1 19519264 19519264 0 0 Insertion 6 FN1657-S Chr3 4882033 4882033 0 0 Insertion 1 FN1657-S Chr3 6525773 6525773 0 0 Insertion 1 FN1657-S Chr3 22117637 22117637 0 0 Insertion 2 FN1657-S Chr4 6033345 6033345 0 0 Insertion 2 LOC_Os04g11090 retrotransposon protein, putative, unclassified, expressed FN1657-S Chr4 8129447 8129447 0 0 Insertion 1 FN1657-S Chr4 8607098 8607098 0 0 Insertion 41 FN1657-S Chr4 16789079 16789079 0 0 Insertion 1 FN1657-S Chr5 9906759 9906759 0 0 Insertion 1 FN1657-S Chr9 19701113 19701113 0 0 Insertion 1 FN1657-S Chr10 11737241 11737241 0 0 Insertion 14 FN1657-S Chr11 6799259 6799259 0 0 Insertion 1 FN1657-S Chr12 19957888 19957888 0 0 Insertion 6 FN1657-S Chr1 2840059 4075206 0 0 Inversion 1235147 LOC_Os01g05960 receptor kinase, putative, expressed FN1657-S Chr1 2840059 4075206 0 0 Inversion 1235147 LOC_Os01g08320 OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed FN1657-S Chr5 16189829 16483804 0 0 Inversion 293975 LOC_Os05g28180 AMP deaminase, putative, expressed FN1657-S Chr5 16189843 16483818 0 0 Inversion 293975 LOC_Os05g28180 AMP deaminase, putative, expressed