FN1701-S Chr1 5135358 G-T 0 0 Single Base Substitution 0 HET FN1701-S Chr1 5463610 T-G 0 0 Single Base Substitution 0 HET FN1701-S Chr1 5471860 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g10390 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1701-S Chr1 7774823 T-A 0 0 Single Base Substitution 0 HET FN1701-S Chr2 4760785 G-C 0 0 Single Base Substitution 0 HET FN1701-S Chr2 31095157 T-A 0 0 Single Base Substitution 0 HET FN1701-S Chr3 4086272 G-A 0 0 Single Base Substitution 0 HET FN1701-S Chr3 8601876 G-T 0 0 Single Base Substitution 0 HET FN1701-S Chr4 11119938 G-A 0 0 Single Base Substitution 0 Homo FN1701-S Chr4 26938486 G-A 0 0 Single Base Substitution 0 Homo FN1701-S Chr5 12806642 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g22550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1701-S Chr6 14437342 G-A 0 0 Single Base Substitution 0 HET FN1701-S Chr6 26834277 A-C 0 0 Single Base Substitution 0 HET FN1701-S Chr6 26854310 G-A 0 0 Single Base Substitution 0 HET FN1701-S Chr7 1437986 G-C 0 0 Single Base Substitution 0 Homo FN1701-S Chr7 11898290 G-A 0 0 Single Base Substitution 0 HET FN1701-S Chr7 27004255 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g45250 transposon protein, putative, unclassified, expressed FN1701-S Chr8 19432988 C-T 0 0 Single Base Substitution 0 Homo FN1701-S Chr9 2328259 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g04400 retrotransposon, putative, centromere-specific, expressed FN1701-S Chr11 6236790 G-A 0 0 Single Base Substitution 0 HET FN1701-S Chr11 8239495 C-T 0 0 Single Base Substitution 0 HET FN1701-S Chr11 9051547 A-G 0 0 Single Base Substitution 0 HET FN1701-S Chr11 24057930 T-A 0 0 Single Base Substitution 0 HET FN1701-S Chr12 14177672 G-A 0 0 Single Base Substitution 0 HET FN1701-S Chr12 14444676 C-A 0 0 Single Base Substitution 0 Homo FN1701-S Chr11 17233628 17233630 0 0 Insertion 2 HET FN1701-S Chr2 26242437 26242439 0 0 Insertion 2 HET FN1701-S Chr5 4442750 4442751 0 0 Insertion 1 HET FN1701-S Chr7 26578145 26578148 0 0 Insertion 3 HET FN1701-S Chr8 5698031 5698092 0 0 Insertion 61 HET FN1701-S Chr11 9618851 9618852 0 0 Insertion 1 frameshift_variant&stop_gained HET LOC_Os11g17270 expressed protein FN1701-S Chr12 9856110 9856111 0 0 Insertion 1 HET FN1701-S Chr12 21760065 21760067 0 0 Insertion 2 HET FN1701-S Chr12 21982395 21982396 0 0 Insertion 1 HET FN1701-S Chr5 13044471 13044476 0 0 Deletion 5 Homo FN1701-S Chr10 1220827 1220828 0 0 Deletion 1 frameshift_variant HET LOC_Os10g02960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1701-S Chr10 4083499 4083510 0 0 Deletion 11 HET FN1701-S Chr10 8759656 8759659 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os10g17380 retrotransposon protein, putative, unclassified FN1701-S Chr12 5181138 5181139 0 0 Deletion 1 HET FN1701-S Chr6 17647001 17674000 0 0 Deletion 26999 LOC_Os06g30520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1701-S Chr6 17647001 17674000 0 0 Deletion 26999 LOC_Os06g30530 expressed protein FN1701-S Chr1 951906 979178 0 0 Inversion 0 LOC_Os01g02740 retrotransposon protein, putative, unclassified, expressed FN1701-S Chr1 951920 979189 0 0 Inversion 0 LOC_Os01g02740 retrotransposon protein, putative, unclassified, expressed FN1701-S Chr10 6874475 6874838 0 0 Inversion 0 LOC_Os10g12354 endonuclease, putative, expressed FN1701-S Chr12 21600247 21600398 0 0 Inversion 0 LOC_Os12g35520 retrotransposon protein, putative, Ty3-gypsy subclass FN1701-S Chr1 951906 979178 0 0 Inversion 0 LOC_Os01g02790 protein kinase domain containing protein, expressed FN1701-S Chr1 951920 979189 0 0 Inversion 0 LOC_Os01g02790 protein kinase domain containing protein, expressed FN1701-S Chr3 12006790 Chr2 14398006 0 Translocation 0 LOC_Os03g21080 guanine nucleotide exchange factor, putative, expressed FN1701-S Chr3 12006791 Chr2 14397713 0 Translocation 0 LOC_Os03g21080 guanine nucleotide exchange factor, putative, expressed FN1701-S Chr3 12006793 Chr2 18772168 0 Translocation 0 LOC_Os03g21080 guanine nucleotide exchange factor, putative, expressed FN1701-S Chr5 15490235 Chr4 3717389 0 Translocation 0 FN1701-S Chr6 17650589 Chr1 17217763 0 Translocation 0 FN1701-S Chr7 10124152 Chr4 10495481 0 Translocation 0 FN1701-S Chr8 22489831 Chr6 14875277 0 Translocation 0 FN1701-S Chr9 9104328 Chr4 17791425 0 Translocation 0 FN1701-S Chr11 16671542 Chr9 11544187 0 Translocation 0 FN1701-S Chr11 24769288 Chr8 20145691 0 Translocation 0 FN1701-S Chr11 28289979 Chr9 2321439 0 Translocation 0 FN1701-S Chr12 20276025 Chr7 6892838 0 Translocation 0 FN1701-S Chr12 27069859 Chr8 26997773 0 Translocation 0 FN1701-S Chr3 12006793 Chr2 18772168 0 Translocation 0 LOC_Os02g31290 AML1, putative, expressed FN1701-S Chr6 17650589 Chr1 17217763 0 Translocation 0 LOC_Os01g31470 mov34/MPN/PAD-1 family protein, expressed FN1701-S Chr9 9104328 Chr4 17791425 0 Translocation 0 LOC_Os04g29840 expressed protein FN1701-S Chr11 16671542 Chr9 11544187 0 Translocation 0 LOC_Os09g19290 retrotransposon protein, putative, unclassified, expressed FN1701-S Chr11 28289979 Chr9 2321439 0 Translocation 0 LOC_Os09g04384 expressed protein