FN2288 Chr1 9596281 A-G 0 0 Single Base Substitution 0 Homo FN2288 Chr2 28532188 T-C 0 0 Single Base Substitution 0 HET FN2288 Chr3 18827254 G-A 0 0 Single Base Substitution 0 HET FN2288 Chr4 16046755 C-T 0 0 Single Base Substitution 0 Homo FN2288 Chr4 24421969 T-C 0 0 Single Base Substitution 0 HET FN2288 Chr5 283265 A-C 0 0 Single Base Substitution 0 HET FN2288 Chr5 26168702 C-A 0 0 Single Base Substitution 0 HET FN2288 Chr6 14111122 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g24110 retrotransposon protein, putative, unclassified, expressed FN2288 Chr6 21703876 T-C 0 0 Single Base Substitution 0 HET FN2288 Chr6 30403581 A-T 0 0 Single Base Substitution 0 HET FN2288 Chr7 10807400 G-C 0 0 Single Base Substitution 0 Homo FN2288 Chr7 19485077 G-A 0 0 Single Base Substitution 0 HET FN2288 Chr7 22194083 A-G 0 0 Single Base Substitution 0 Homo FN2288 Chr7 25430220 T-G 0 0 Single Base Substitution 0 HET FN2288 Chr8 3923415 C-A 0 0 Single Base Substitution 0 HET FN2288 Chr8 4943005 G-A 0 0 Single Base Substitution 0 HET FN2288 Chr9 9268311 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g15250 retrotransposon protein, putative, unclassified, expressed FN2288 Chr9 9306185 G-C 0 0 Single Base Substitution 0 HET FN2288 Chr9 17982924 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g29570 expressed protein FN2288 Chr9 18478208 G-C 0 0 Single Base Substitution 0 HET FN2288 Chr9 20958537 G-A 0 0 Single Base Substitution 0 HET FN2288 Chr10 19417311 T-A 0 0 Single Base Substitution 0 HET FN2288 Chr11 9803463 T-A 0 0 Single Base Substitution 0 HET FN2288 Chr12 8935461 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g15650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2288 Chr5 2881419 2881421 0 0 Insertion 2 HET FN2288 Chr6 10663870 10663871 0 0 Insertion 1 HET FN2288 Chr6 12165190 12165191 0 0 Insertion 1 HET FN2288 Chr10 5102960 5102961 0 0 Insertion 1 frameshift_variant HET LOC_Os10g09460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2288 Chr10 13703828 13703829 0 0 Insertion 1 HET FN2288 Chr12 13921592 13921595 0 0 Insertion 3 HET FN2288 Chr12 23760671 23760743 0 0 Insertion 72 HET FN2288 Chr1 11814742 11814750 0 0 Deletion 8 Homo FN2288 Chr1 37451841 37451843 0 0 Deletion 2 frameshift_variant HET LOC_Os01g64540 anthocyanidin 3-O-glucosyltransferase, putative, expressed FN2288 Chr4 17642430 17642446 0 0 Deletion 16 Homo FN2288 Chr5 26304417 26304419 0 0 Deletion 2 frameshift_variant HET LOC_Os05g45340 ATP binding protein, putative, expressed FN2288 Chr7 7471450 7471462 0 0 Deletion 12 HET FN2288 Chr4 7294736 7294738 0 0 Deletion 2 HET FN2288 Chr6 10986253 10986255 0 0 Deletion 2 HET FN2288 Chr8 6973838 6973839 0 0 Deletion 1 HET FN2288 Chr11 14246001 14275000 0 0 Deletion 28999 LOC_Os11g25010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2288 Chr11 14246001 14275000 0 0 Deletion 28999 LOC_Os11g25020 plant-specific domain TIGR01615 family protein, expressed FN2288 Chr11 14246001 14275000 0 0 Deletion 28999 LOC_Os11g25040 plant-specific domain TIGR01615 family protein, expressed FN2288 Chr11 14246001 14275000 0 0 Deletion 28999 LOC_Os11g25050 retrotransposon protein, putative, unclassified, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g55920 hydrolase, acting on carbon-nitrogen, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g55930 ribosomal protein, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g55940 expressed protein FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g55950 H-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g55960 EF hand family protein, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g55970 uncharacterized protein ycf44, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g55980 expressed protein FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g55990 homeobox domain containing protein, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56000 PHLOEM 2-LIKE A10, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56010 bZIP transcription factor domain containing protein, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56020 RNA recognition motif containing protein, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56030 expressed protein FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56040 retrotransposon protein, putative, unclassified, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56050 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56060 CSLC9 - cellulose synthase-like family C, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56070 expressed protein FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56080 hypothetical protein FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56090 MYB family transcription factor, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56100 expressed protein FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56110 homeobox protein knotted-1, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56120 expressed protein FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56130 lichenase-2 precursor, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56140 homeobox protein rough sheath 1, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56160 lectin-like receptor kinase 7, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56170 expressed protein FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56180 legume lectins beta domain containing protein, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56190 cytochrome c oxidase-related, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56200 expressed protein FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56220 stress-induced protein, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56234 myb/SANT domain protein, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56241 40S ribosomal protein S29, putative, expressed FN2288 Chr3 31832001 32054000 0 0 Deletion 221999 LOC_Os03g56250 LRR receptor-like protein kinase, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56260 kinesin motor domain containing protein, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56270 receptor protein kinase CLAVATA1 precursor, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56280 lactate/malate dehydrogenase, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56290 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56300 4Fe-4S binding domain containing protein, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56310 5-nucleotidase domain-containing protein, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56320 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56330 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56340 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56350 hypothetical protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56360 transposon protein, putative, unclassified, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56370 methyltransferase, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56380 methyltransferase, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56390 tRNA wybutosine-synthesizing protein 1, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56400 pentatricopeptide, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56410 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56420 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56430 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56440 OsFBX110 - F-box domain containing protein, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56450 OsFBX111 - F-box domain containing protein, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56460 glucose-6-phosphate isomerase, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56470 protein kinase family protein, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56480 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56490 DNA topoisomerase IV subunit A, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56500 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56510 OsFBX112 - F-box domain containing protein, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56520 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56530 retrotransposon protein, putative, unclassified, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56540 heat shock protein DnaJ, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56560 retrotransposon protein, putative, unclassified, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56566 retrotransposon protein, putative, unclassified, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56572 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56580 no apical meristem protein, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56590 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56600 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56610 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56620 expressed protein FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56630 transposon protein, putative, unclassified, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56640 transposon protein, putative, unclassified, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56660 calmodulin binding protein, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56670 photosystem I reaction center subunit III, chloroplast precursor, putative, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56676 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56682 DEFL40 - Defensin and Defensin-like DEFL family FN2288 Chr3 32056001 32301000 0 0 Deletion 244999 LOC_Os03g56690 expressed protein FN2288 Chr11 10613270 11273458 0 0 Inversion 0 LOC_Os11g18730 glycosyl hydrolase family 3 protein, putative, expressed FN2288 Chr11 10613270 11273458 0 0 Inversion 0 LOC_Os11g19560 transposon protein, putative, CACTA, En/Spm sub-class FN2288 Chr6 9896698 Chr1 9951729 0 Translocation 0 FN2288 Chr7 25428162 Chr4 34079493 0 Translocation 0 FN2288 Chr8 6538925 Chr4 3094401 0 Translocation 0 LOC_Os08g11110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2288 Chr9 12688235 Chr1 14628333 0 Translocation 0 FN2288 Chr10 11709917 Chr2 18066714 0 Translocation 0 LOC_Os10g22570 cellulase, putative, expressed FN2288 Chr11 6995380 Chr6 21780167 0 Translocation 0 FN2288 Chr11 10612772 Chr6 26208303 0 Translocation 0 LOC_Os11g18730 glycosyl hydrolase family 3 protein, putative, expressed FN2288 Chr11 10613178 Chr9 1055010 0 Translocation 0 LOC_Os11g18730 glycosyl hydrolase family 3 protein, putative, expressed FN2288 Chr11 11614879 Chr4 34199277 0 Translocation 0 FN2288 Chr11 11618820 Chr4 34079837 0 Translocation 0 LOC_Os11g20110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2288 Chr11 15339318 Chr3 15104039 0 Translocation 0 FN2288 Chr12 26092372 Chr1 17722019 0 Translocation 0 FN2288 Chr11 10612772 Chr6 26208303 0 Translocation 0 LOC_Os06g43580 expressed protein