FN2399 Chr1 17783841 G-A 0 0 Single Base Substitution 0 HET FN2399 Chr1 22164655 A-G 0 0 Single Base Substitution 0 Homo FN2399 Chr1 28194750 T-C 0 0 Single Base Substitution 0 HET FN2399 Chr2 9328863 G-T 0 0 Single Base Substitution 0 HET FN2399 Chr2 34669383 A-G 0 0 Single Base Substitution 0 HET FN2399 Chr3 1810594 A-T 0 0 Single Base Substitution 0 HET FN2399 Chr3 6971399 C-A 0 0 Single Base Substitution 0 Homo FN2399 Chr3 15738599 C-G 0 0 Single Base Substitution 0 HET FN2399 Chr3 21691461 T-C 0 0 Single Base Substitution 0 Homo FN2399 Chr3 31027138 C-T 0 0 Single Base Substitution 0 HET FN2399 Chr3 34770299 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g61220 DEAD-box ATP-dependent RNA helicase 3, putative, expressed FN2399 Chr4 31764340 C-T 0 0 Single Base Substitution 0 HET FN2399 Chr5 6613827 G-T 0 0 Single Base Substitution 0 HET FN2399 Chr5 16352376 G-A 0 0 Single Base Substitution 0 HET FN2399 Chr5 21195630 C-T 0 0 Single Base Substitution 0 HET FN2399 Chr7 15042155 C-T 0 0 Single Base Substitution 0 HET FN2399 Chr8 1726901 C-T 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR HET LOC_Os08g03650 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed FN2399 Chr8 18705606 C-T 0 0 Single Base Substitution 0 Homo FN2399 Chr8 18705610 C-T 0 0 Single Base Substitution 0 Homo FN2399 Chr9 16440121 T-C 0 0 Single Base Substitution 0 Homo FN2399 Chr9 22316513 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g38850 OsWAK91 - OsWAK receptor-like protein kinase, expressed FN2399 Chr9 22316522 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g38850 OsWAK91 - OsWAK receptor-like protein kinase, expressed FN2399 Chr10 4496784 G-A 0 0 Single Base Substitution 0 HET FN2399 Chr11 4368596 C-T 0 0 Single Base Substitution 0 HET FN2399 Chr11 8525552 G-A 0 0 Single Base Substitution 0 HET FN2399 Chr11 10859163 C-A 0 0 Single Base Substitution 0 HET FN2399 Chr11 14927949 A-G 0 0 Single Base Substitution 0 HET FN2399 Chr11 14927952 G-A 0 0 Single Base Substitution 0 HET FN2399 Chr11 22920699 A-T 0 0 Single Base Substitution 0 Homo FN2399 Chr11 25180415 G-C 0 0 Single Base Substitution 0 Homo FN2399 Chr11 25180458 G-A 0 0 Single Base Substitution 0 Homo FN2399 Chr11 25180459 G-A 0 0 Single Base Substitution 0 Homo FN2399 Chr11 22241523 22241525 0 0 Insertion 2 frameshift_variant Homo LOC_Os11g37670 expressed protein FN2399 Chr6 31526 31528 0 0 Insertion 2 HET FN2399 Chr6 7390721 7390722 0 0 Insertion 1 frameshift_variant HET LOC_Os06g13430 retrotransposon protein, putative, unclassified, expressed FN2399 Chr6 20152409 20152418 0 0 Insertion 9 HET FN2399 Chr10 4766308 4766311 0 0 Insertion 3 HET FN2399 Chr4 9539540 9539541 0 0 Deletion 1 frameshift_variant Homo LOC_Os04g17440 retrotransposon protein, putative, unclassified, expressed FN2399 Chr5 22427433 22427438 0 0 Deletion 5 Homo FN2399 Chr5 23407063 23407068 0 0 Deletion 5 Homo FN2399 Chr8 15152360 15152369 0 0 Deletion 9 Homo FN2399 Chr3 11358001 11416000 0 0 Deletion 57999 LOC_Os03g20110 hypothetical protein FN2399 Chr3 11358001 11416000 0 0 Deletion 57999 LOC_Os03g20120 glycosyl transferase 8 domain containing protein, putative, expressed FN2399 Chr3 11358001 11416000 0 0 Deletion 57999 LOC_Os03g20140 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2399 Chr3 11358001 11416000 0 0 Deletion 57999 LOC_Os03g20150 retrotransposon protein, putative, unclassified FN2399 Chr3 11358001 11416000 0 0 Deletion 57999 LOC_Os03g20170 ABC transporter, ATP-binding protein, putative, expressed FN2399 Chr3 11358001 11416000 0 0 Deletion 57999 LOC_Os03g20180 ECT protein, putative, expressed FN2399 Chr3 11358001 11416000 0 0 Deletion 57999 LOC_Os03g20190 pentatricopeptide, putative, expressed FN2399 Chr1 19822604 19823068 0 0 Inversion 0 FN2399 Chr3 1233524 1737221 0 0 Inversion 0 LOC_Os03g03020 L11 domain containing ribosomal protein, putative, expressed FN2399 Chr3 1247870 1251827 0 0 Inversion 0 FN2399 Chr3 1239483 Chr1 5446263 0 Translocation 0 LOC_Os03g03034 flavonol synthase/flavanone 3-hydroxylase, putative, expressed FN2399 Chr3 1247887 Chr1 5446273 0 Translocation 0 FN2399 Chr3 35300948 Chr2 16480613 0 Translocation 0 FN2399 Chr7 5266803 Chr3 1737878 0 Translocation 0 LOC_Os07g09900 disease resistance protein RPM1, putative, expressed FN2399 Chr9 4916906 Chr2 11824568 0 Translocation 0 FN2399 Chr9 9371646 Chr7 4204682 0 Translocation 0 FN2399 Chr9 16416491 Chr2 2673877 0 Translocation 0 FN2399 Chr10 3120022 Chr1 23590359 0 Translocation 0 FN2399 Chr10 7833402 Chr9 2382166 0 Translocation 0 LOC_Os10g14950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2399 Chr10 12429129 Chr4 4810194 0 Translocation 0 FN2399 Chr12 262272 Chr6 14440082 0 Translocation 0 FN2399 Chr12 5819918 Chr3 2260684 0 Translocation 0 FN2399 Chr12 9190664 Chr3 1737871 0 Translocation 0 FN2399 Chr12 9190682 Chr3 1737237 0 Translocation 0 FN2399 Chr3 1239483 Chr1 5446263 0 Translocation 0 LOC_Os01g10350 MPPN domain containing protein, expressed FN2399 Chr3 35300948 Chr2 16480613 0 Translocation 0 LOC_Os02g27830 expressed protein FN2399 Chr7 5266803 Chr3 1737878 0 Translocation 0 LOC_Os03g03860 expressed protein FN2399 Chr10 7833402 Chr9 2382166 0 Translocation 0 LOC_Os09g04470 retrotransposon protein, putative, Ty3-gypsy subclass FN2399 Chr12 9190664 Chr3 1737871 0 Translocation 0 LOC_Os03g03860 expressed protein