FN2596-S Chr1 12213379 C-A 0 0 Single Base Substitution 0 HET FN2596-S Chr1 17006053 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g31100 retrotransposon, putative, centromere-specific FN2596-S Chr1 22973654 T-C 0 0 Single Base Substitution 0 HET FN2596-S Chr1 26534250 C-G 0 0 Single Base Substitution 0 HET FN2596-S Chr1 36530062 T-C 0 0 Single Base Substitution 0 HET FN2596-S Chr1 38935286 G-T 0 0 Single Base Substitution 0 HET FN2596-S Chr1 42454946 C-T 0 0 Single Base Substitution 0 HET FN2596-S Chr2 7963719 T-A 0 0 Single Base Substitution 0 HET FN2596-S Chr2 10032938 C-A 0 0 Single Base Substitution 0 HET FN2596-S Chr2 21721007 C-T 0 0 Single Base Substitution 0 Homo FN2596-S Chr2 21721009 C-T 0 0 Single Base Substitution 0 Homo FN2596-S Chr2 25902776 A-G 0 0 Single Base Substitution 0 HET FN2596-S Chr2 26805010 C-G 0 0 Single Base Substitution 0 HET FN2596-S Chr2 30483287 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g49890 retrotransposon protein, putative, unclassified, expressed FN2596-S Chr3 6108489 C-T 0 0 Single Base Substitution 0 Homo FN2596-S Chr3 8663825 C-A 0 0 Single Base Substitution 0 HET FN2596-S Chr3 11543745 C-A 0 0 Single Base Substitution 0 HET FN2596-S Chr3 13701056 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g24130 CXXC1 - Cysteine-rich protein with CXXC and CXXXC motifs precursor, putative, expressed FN2596-S Chr3 18818890 C-G 0 0 Single Base Substitution 0 Homo FN2596-S Chr3 19086029 C-T 0 0 Single Base Substitution 0 HET FN2596-S Chr3 23179854 A-G 0 0 Single Base Substitution 0 HET FN2596-S Chr3 36110519 C-A 0 0 Single Base Substitution 0 HET FN2596-S Chr4 7475974 A-C 0 0 Single Base Substitution 0 Homo FN2596-S Chr4 12830665 C-T 0 0 Single Base Substitution 0 HET FN2596-S Chr4 23521757 C-T 0 0 Single Base Substitution 0 Homo FN2596-S Chr4 23521758 C-T 0 0 Single Base Substitution 0 Homo FN2596-S Chr4 27233470 C-T 0 0 Single Base Substitution 0 Homo FN2596-S Chr5 1205643 C-G 0 0 Single Base Substitution 0 Homo FN2596-S Chr5 2828805 C-A 0 0 Single Base Substitution 0 HET FN2596-S Chr5 4902799 G-A 0 0 Single Base Substitution 0 HET FN2596-S Chr6 2563271 T-G 0 0 Single Base Substitution 0 HET FN2596-S Chr6 2716512 A-G 0 0 Single Base Substitution 0 Homo FN2596-S Chr6 3629968 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g07530 retrotransposon protein, putative, unclassified, expressed FN2596-S Chr6 12967864 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g22340 cytochrome P450, putative, expressed FN2596-S Chr6 14306536 G-A 0 0 Single Base Substitution 0 HET FN2596-S Chr6 16996204 C-T 0 0 Single Base Substitution 0 HET FN2596-S Chr6 29546671 C-G 0 0 Single Base Substitution 0 HET FN2596-S Chr7 2868294 T-C 0 0 Single Base Substitution 0 HET FN2596-S Chr7 6214344 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g11270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2596-S Chr7 7219007 C-T 0 0 Single Base Substitution 0 HET FN2596-S Chr7 7296632 C-T 0 0 Single Base Substitution 0 HET FN2596-S Chr7 27590114 C-T 0 0 Single Base Substitution 0 HET FN2596-S Chr8 11002016 G-A 0 0 Single Base Substitution 0 Homo FN2596-S Chr8 12501136 T-C 0 0 Single Base Substitution 0 HET FN2596-S Chr8 20868065 C-G 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR Homo LOC_Os08g33450 transposon protein, putative, unclassified FN2596-S Chr8 22227856 A-T 0 0 Single Base Substitution 0 HET FN2596-S Chr8 23633789 C-T 0 0 Single Base Substitution 0 HET FN2596-S Chr9 2159018 G-T 0 0 Single Base Substitution 0 HET FN2596-S Chr9 4184289 C-T 0 0 Single Base Substitution 0 Homo FN2596-S Chr9 4442952 G-A 0 0 Single Base Substitution 0 HET FN2596-S Chr9 5621028 C-T 0 0 Single Base Substitution 0 HET FN2596-S Chr9 6889303 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g12190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2596-S Chr9 13623692 G-T 0 0 Single Base Substitution 0 Homo FN2596-S Chr9 17044585 G-A 0 0 Single Base Substitution 0 HET FN2596-S Chr9 19718385 T-C 0 0 Single Base Substitution 0 Homo FN2596-S Chr10 11112126 C-T 0 0 Single Base Substitution 0 HET FN2596-S Chr11 11917951 T-G 0 0 Single Base Substitution 0 Homo FN2596-S Chr11 13266388 A-G 0 0 Single Base Substitution 0 Homo FN2596-S Chr12 2059026 C-T 0 0 Single Base Substitution 0 HET FN2596-S Chr12 9737410 C-T 0 0 Single Base Substitution 0 HET FN2596-S Chr3 15138760 15138781 0 0 Insertion 21 inframe_insertion HET LOC_Os03g26510 hypothetical protein FN2596-S Chr7 6831277 6831323 0 0 Insertion 46 HET FN2596-S Chr7 11715053 11715069 0 0 Insertion 16 HET FN2596-S Chr1 24361417 24361424 0 0 Deletion 7 HET FN2596-S Chr1 29058217 29058227 0 0 Deletion 10 Homo FN2596-S Chr3 1853757 1853766 0 0 Deletion 9 Homo FN2596-S Chr3 24597244 24597265 0 0 Deletion 21 frameshift_variant&splice_acceptor_variant&splice_region_variant&intron_variant HET LOC_Os03g43860 SNF7 domain containing protein, putative, expressed FN2596-S Chr4 5052607 5052609 0 0 Deletion 2 Homo FN2596-S Chr5 14996125 14996126 0 0 Deletion 1 Homo FN2596-S Chr6 24675074 24675076 0 0 Deletion 2 Homo FN2596-S Chr6 25231905 25231906 0 0 Deletion 1 HET FN2596-S Chr12 19991188 Chr9 7926699 0 Translocation 0 FN2596-S Chr12 19991188 Chr9 7926699 0 Translocation 0 LOC_Os09g13630 ZOS9-03 - C2H2 zinc finger protein, expressed