FN3150-S Chr1 12980255 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr1 21600720 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr1 33909358 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN3150-S Chr2 4831052 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr2 7007985 T-A 0 0 Single Base Substitution 0 INTRON HET FN3150-S Chr2 16342644 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr3 284468 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3150-S Chr3 30759293 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr5 1834985 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr5 3715097 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr5 3984727 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr5 3984728 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr5 10279717 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g17880 retrotransposon protein, putative, unclassified, expressed FN3150-S Chr5 13437287 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3150-S Chr6 25325330 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr6 27974374 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr7 8716231 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr8 2686952 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3150-S Chr8 15759175 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr8 23173134 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN3150-S Chr9 5223806 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g09680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3150-S Chr9 11348548 G-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN3150-S Chr9 19900906 A-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN3150-S Chr10 10687866 T-A 0 0 Single Base Substitution 0 INTRON HET FN3150-S Chr10 10687867 C-T 0 0 Single Base Substitution 0 INTRON HET FN3150-S Chr11 1506084 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3150-S Chr1 38875578 38875578 0 0 Insertion 2 INTERGENIC HOMO FN3150-S Chr3 27422377 27422377 0 0 Insertion 2 INTERGENIC HET FN3150-S Chr8 23181519 23181519 0 0 Insertion 2 INTERGENIC HET FN3150-S Chr2 23317491 23317491 0 0 Insertion 1 upstream_gene_variant HET FN3150-S Chr2 24758529 24758529 0 0 Insertion 1 upstream_gene_variant HET FN3150-S Chr3 19976716 19976716 0 0 Insertion 1 upstream_gene_variant HET FN3150-S Chr4 3903077 3903077 0 0 Insertion 1 upstream_gene_variant HET FN3150-S Chr4 12162934 12162934 0 0 Insertion 1 upstream_gene_variant HET FN3150-S Chr5 20644144 20644144 0 0 Insertion 1 upstream_gene_variant HET FN3150-S Chr5 26523072 26523072 0 0 Insertion 2 upstream_gene_variant HET FN3150-S Chr5 29697636 29697636 0 0 Insertion 1 upstream_gene_variant HET FN3150-S Chr6 23088669 23088669 0 0 Insertion 2 upstream_gene_variant HET FN3150-S Chr7 14901434 14901434 0 0 Insertion 1 5_prime_UTR_variant HET FN3150-S Chr7 23030548 23030548 0 0 Insertion 2 upstream_gene_variant HET FN3150-S Chr8 17446884 17446884 0 0 Insertion 1 upstream_gene_variant HET FN3150-S Chr10 13572554 13572554 0 0 Insertion 1 upstream_gene_variant HET FN3150-S Chr11 12120658 12120658 0 0 Insertion 1 intergenic_region HET FN3150-S Chr1 41672 41673 0 0 Deletion 1 INTERGENIC HOMO FN3150-S Chr4 27358118 27358119 0 0 Deletion 1 INTERGENIC HET FN3150-S Chr6 20638035 20638042 0 0 Deletion 7 FRAME_SHIFT HET LOC_Os06g35410 growth regulator related protein, putative, expressed FN3150-S Chr10 4915305 4915314 0 0 Deletion 9 INTRON HOMO FN3150-S Chr12 24334382 24334391 0 0 Deletion 9 INTERGENIC HOMO FN3150-S Chr12 24563119 24563128 0 0 Deletion 9 INTERGENIC HOMO FN3150-S Chr12 25229926 25229933 0 0 Deletion 7 INTERGENIC HET FN3150-S Chr1 16856183 16856184 0 0 Deletion 1 intergenic_region HET FN3150-S Chr2 25290365 25290366 0 0 Deletion 1 upstream_gene_variant HET FN3150-S Chr3 17283551 17283558 0 0 Deletion 7 upstream_gene_variant HET FN3150-S Chr3 27905002 27905005 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os03g48990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3150-S Chr3 34655914 34655915 0 0 Deletion 1 upstream_gene_variant HET FN3150-S Chr4 3503031 3503041 0 0 Deletion 10 upstream_gene_variant HET FN3150-S Chr4 11018544 11018545 0 0 Deletion 1 frameshift_variant HET LOC_Os04g19720 retrotransposon protein, putative, unclassified, expressed FN3150-S Chr8 13515170 13515171 0 0 Deletion 1 upstream_gene_variant HET FN3150-S Chr11 5831539 5831540 0 0 Deletion 1 upstream_gene_variant HET FN3150-S Chr11 16829744 16829747 0 0 Deletion 3 downstream_gene_variant HET FN3150-S Chr12 23217879 23217880 0 0 Deletion 1 intron_variant HET FN3150-S Chr5 27259001 27278000 0 0 Deletion 18999 LOC_Os05g47590 expressed protein FN3150-S Chr5 27259001 27278000 0 0 Deletion 18999 LOC_Os05g47600 retrotransposon protein, putative, Ty3-gypsy subclass FN3150-S Chr5 27259001 27278000 0 0 Deletion 18999 LOC_Os05g47610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3150-S Chr5 27259001 27278000 0 0 Deletion 18999 LOC_Os05g48450 aminotransferase domain containing protein, putative, expressed FN3150-S Chr9 4637001 4674000 0 0 Deletion 36999 LOC_Os09g08810 retrotransposon protein, putative, unclassified FN3150-S Chr9 4637001 4674000 0 0 Deletion 36999 LOC_Os09g08820 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3150-S Chr9 4637001 4674000 0 0 Deletion 36999 LOC_Os09g08830 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3150-S Chr9 4637001 4674000 0 0 Deletion 36999 LOC_Os09g08840 expressed protein FN3150-S Chr9 4637001 4674000 0 0 Deletion 36999 LOC_Os09g08850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3150-S Chr9 4637001 4674000 0 0 Deletion 36999 LOC_Os09g08940 transposon protein, putative, CACTA, En/Spm sub-class FN3150-S Chr3 31303078 31420148 0 0 Inversion 117070 LOC_Os03g55050 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN3150-S Chr3 31303080 31422566 0 0 Inversion 119486 LOC_Os03g55050 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN3150-S Chr5 27258146 27359698 0 0 Inversion 101552 FN3150-S Chr3 31303080 31422566 0 0 Inversion 119486 LOC_Os03g55220 bHelix-loop-helix transcription factor, putative, expressed FN3150-S Chr4 20219825 Chr2 6539286 0 Translocation 0 FN3150-S Chr5 7361082 Chr1 31164154 0 Translocation 0 FN3150-S Chr5 12284708 Chr4 8543092 0 Translocation 0 FN3150-S Chr7 24466982 Chr6 28719834 0 Translocation 0 LOC_Os07g40830 app1, putative, expressed FN3150-S Chr8 10034555 Chr4 6704992 0 Translocation 0 FN3150-S Chr12 12299055 Chr4 35483303 0 Translocation 0 LOC_Os12g21840 expressed protein FN3150-S Chr12 19144011 Chr5 18325136 0 Translocation 0 FN3150-S Chr12 23667320 Chr1 14628633 0 Translocation 0 FN3150-S Chr6 13727780 Chr1 3306882 0 Translocation 0 LOC_Os01g07020 POEI39 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed FN3150-S Chr6 15250723 Chr2 11538080 0 Translocation 0 LOC_Os02g19720 retrotransposon protein, putative, unclassified, expressed