FN3185-S Chr1 28566540 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3185-S Chr2 7825985 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr2 28210316 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3185-S Chr2 32890447 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr2 34059676 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr3 6549370 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3185-S Chr3 14324969 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g25080 OsFBX86 - F-box domain containing protein, expressed FN3185-S Chr3 19846039 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3185-S Chr4 5376828 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3185-S Chr4 10792584 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN3185-S Chr4 12122074 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3185-S Chr4 15996966 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN3185-S Chr4 24062778 G-T 0 0 Single Base Substitution 0 INTRON HET FN3185-S Chr4 26357228 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr4 35274577 T-C 0 0 Single Base Substitution 0 INTRON HET FN3185-S Chr4 35274581 G-A 0 0 Single Base Substitution 0 INTRON HET FN3185-S Chr5 8567704 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g15090 retrotransposon protein, putative, unclassified, expressed FN3185-S Chr5 11937331 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g20360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3185-S Chr5 17243544 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr5 27051730 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr6 26810844 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g44410 histidine kinase, putative, expressed FN3185-S Chr7 832327 C-T 0 0 Single Base Substitution 0 INTRON HET FN3185-S Chr7 14026266 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3185-S Chr7 15957797 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr8 251515 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN3185-S Chr8 4411673 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN3185-S Chr8 11012988 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3185-S Chr9 3698061 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os09g07420 retrotransposon protein, putative, unclassified, expressed FN3185-S Chr9 16329569 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g26870 BRCA1 C Terminus domain containing protein, expressed FN3185-S Chr9 18624899 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr10 5486005 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3185-S Chr11 5813184 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3185-S Chr11 5813185 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3185-S Chr11 22389569 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3185-S Chr12 3776312 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr12 4375134 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr12 23541306 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr12 23686766 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr12 26505355 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr12 26505357 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3185-S Chr9 22397593 22397593 0 0 Insertion 3 INTERGENIC HET FN3185-S Chr11 3979219 3979219 0 0 Insertion 3 INTERGENIC HET FN3185-S Chr3 19453451 19453451 0 0 Insertion 8 downstream_gene_variant HET FN3185-S Chr9 7596473 7596473 0 0 Insertion 1 upstream_gene_variant HET FN3185-S Chr11 28746600 28746600 0 0 Insertion 1 upstream_gene_variant HET FN3185-S Chr1 18283076 18283077 0 0 Deletion 1 INTERGENIC HET FN3185-S Chr1 33990857 33990858 0 0 Deletion 1 INTERGENIC HOMO FN3185-S Chr1 34058206 34058216 0 0 Deletion 10 INTRON HOMO FN3185-S Chr3 3277732 3277735 0 0 Deletion 3 INTERGENIC HOMO FN3185-S Chr3 18026433 18026434 0 0 Deletion 1 INTERGENIC HOMO FN3185-S Chr4 1954027 1954041 0 0 Deletion 14 UTR_5_PRIME HOMO FN3185-S Chr4 18370353 18370357 0 0 Deletion 4 INTERGENIC HOMO FN3185-S Chr4 34108120 34108123 0 0 Deletion 3 INTERGENIC HET FN3185-S Chr5 15968074 15968076 0 0 Deletion 2 INTRON HET FN3185-S Chr5 23464767 23464773 0 0 Deletion 6 CODON_DELETION HET LOC_Os05g39930 spotted leaf 11, putative, expressed FN3185-S Chr6 1575790 1575795 0 0 Deletion 5 INTRON HOMO FN3185-S Chr7 215989 215991 0 0 Deletion 2 INTRON HET FN3185-S Chr7 4565010 4565013 0 0 Deletion 3 INTERGENIC HET FN3185-S Chr8 963282 963303 0 0 Deletion 21 INTRON HOMO FN3185-S Chr9 206099 206102 0 0 Deletion 3 INTERGENIC HOMO FN3185-S Chr9 8548251 8548258 0 0 Deletion 7 INTERGENIC HOMO FN3185-S Chr9 17357202 17357212 0 0 Deletion 10 FRAME_SHIFT HET LOC_Os09g28540 expressed protein FN3185-S Chr9 22881845 22881848 0 0 Deletion 3 INTERGENIC HET FN3185-S Chr10 166206 166210 0 0 Deletion 4 INTERGENIC HET FN3185-S Chr10 8477114 8477127 0 0 Deletion 13 INTERGENIC HOMO FN3185-S Chr10 16172641 16172651 0 0 Deletion 10 INTRON HET FN3185-S Chr10 17505608 17505622 0 0 Deletion 14 INTERGENIC HET FN3185-S Chr12 16018037 16018042 0 0 Deletion 5 INTERGENIC HOMO FN3185-S Chr12 27493068 27493073 0 0 Deletion 5 FRAME_SHIFT HET LOC_Os12g44350 actin, putative, expressed FN3185-S Chr4 3522088 3522158 0 0 Deletion 70 intron_variant HET FN3185-S Chr6 56201 56202 0 0 Deletion 1 intergenic_region HET FN3185-S Chr6 5162589 5162591 0 0 Deletion 2 intron_variant HET FN3185-S Chr6 12216078 12216121 0 0 Deletion 43 downstream_gene_variant HET FN3185-S Chr7 4622879 4622880 0 0 Deletion 1 upstream_gene_variant HET FN3185-S Chr9 15181387 15181389 0 0 Deletion 2 upstream_gene_variant HET FN3185-S Chr9 16214876 16214878 0 0 Deletion 2 upstream_gene_variant HET FN3185-S Chr2 2664001 2709000 0 0 Deletion 44999 LOC_Os02g05520 expressed protein FN3185-S Chr2 2664001 2709000 0 0 Deletion 44999 LOC_Os02g05530 expressed protein FN3185-S Chr2 2664001 2709000 0 0 Deletion 44999 LOC_Os02g05540 expressed protein FN3185-S Chr2 2664001 2709000 0 0 Deletion 44999 LOC_Os02g05550 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3185-S Chr2 2664001 2709000 0 0 Deletion 44999 LOC_Os02g05560 retrotransposon protein, putative, unclassified, expressed FN3185-S Chr2 2664001 2709000 0 0 Deletion 44999 LOC_Os02g05570 transposon protein, putative, CACTA, En/Spm sub-class FN3185-S Chr2 2664001 2709000 0 0 Deletion 44999 LOC_Os02g05580 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3185-S Chr2 2664001 2709000 0 0 Deletion 44999 LOC_Os02g05600 expressed protein FN3185-S Chr2 2713001 2733000 0 0 Deletion 19999 LOC_Os02g05610 ZOS2-03 - C2H2 zinc finger protein, expressed FN3185-S Chr2 2713001 2733000 0 0 Deletion 19999 LOC_Os02g05850 transposon protein, putative, unclassified, expressed FN3185-S Chr7 11086758 Chr4 32086848 0 Translocation 0 FN3185-S Chr8 3091495 Chr1 41813589 0 Translocation 0 FN3185-S Chr11 19757340 Chr1 33088407 0 Translocation 0 FN3185-S Chr11 17795284 Chr7 29118626 0 Translocation 0 LOC_Os07g48630 ethylene-insensitive 3, putative, expressed