FN3501-S Chr1 39835803 A-G 0 0 Single Base Substitution 0 HET FN3501-S Chr1 40257617 G-A 0 0 Single Base Substitution 0 HET FN3501-S Chr2 2447803 A-C 0 0 Single Base Substitution 0 HET FN3501-S Chr2 18606584 T-A 0 0 Single Base Substitution 0 HET FN3501-S Chr2 29279455 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g47860 uridine kinase, putative, expressed FN3501-S Chr2 30365868 A-C 0 0 Single Base Substitution 0 HET FN3501-S Chr3 18030302 C-A 0 0 Single Base Substitution 0 Homo FN3501-S Chr3 23123639 G-A 0 0 Single Base Substitution 0 Homo FN3501-S Chr3 28043010 G-A 0 0 Single Base Substitution 0 Homo FN3501-S Chr3 31669500 G-A 0 0 Single Base Substitution 0 HET FN3501-S Chr6 20063285 C-A 0 0 Single Base Substitution 0 HET FN3501-S Chr7 25322290 G-A 0 0 Single Base Substitution 0 Homo FN3501-S Chr8 12324413 C-T 0 0 Single Base Substitution 0 Homo FN3501-S Chr8 12564153 T-A 0 0 Single Base Substitution 0 HET FN3501-S Chr8 15835461 C-A 0 0 Single Base Substitution 0 HET FN3501-S Chr9 14098477 A-G 0 0 Single Base Substitution 0 Homo FN3501-S Chr10 893596 C-T 0 0 Single Base Substitution 0 HET FN3501-S Chr10 19304573 C-A 0 0 Single Base Substitution 0 HET FN3501-S Chr11 11642319 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os11g20150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3501-S Chr11 27649405 A-G 0 0 Single Base Substitution 0 Homo FN3501-S Chr12 3788225 G-A 0 0 Single Base Substitution 0 Homo FN3501-S Chr12 13851771 G-A 0 0 Single Base Substitution 0 HET FN3501-S Chr12 14386291 C-A 0 0 Single Base Substitution 0 Homo FN3501-S Chr1 19903881 19903883 0 0 Insertion 2 HET FN3501-S Chr9 2883054 2883055 0 0 Insertion 1 frameshift_variant Homo LOC_Os09g06150 retrotransposon protein, putative, unclassified, expressed FN3501-S Chr12 4240891 4240892 0 0 Insertion 1 Homo FN3501-S Chr2 12409837 12409846 0 0 Insertion 9 HET FN3501-S Chr4 12162934 12162935 0 0 Insertion 1 HET FN3501-S Chr6 17523889 17523893 0 0 Insertion 4 frameshift_variant&stop_gained HET LOC_Os06g30340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3501-S Chr7 11926154 11926155 0 0 Insertion 1 HET FN3501-S Chr7 28467178 28467180 0 0 Insertion 2 HET FN3501-S Chr8 1158721 1158734 0 0 Insertion 13 HET FN3501-S Chr10 3255591 3255592 0 0 Insertion 1 HET FN3501-S Chr12 22349029 22349030 0 0 Insertion 1 HET FN3501-S Chr1 18859921 18859923 0 0 Deletion 2 HET FN3501-S Chr1 31333768 31333770 0 0 Deletion 2 frameshift_variant Homo LOC_Os01g54480 serine/threonine protein kinase, putative, expressed FN3501-S Chr4 28169394 28169399 0 0 Deletion 5 Homo FN3501-S Chr7 14059252 14059254 0 0 Deletion 2 Homo FN3501-S Chr11 27667956 27667960 0 0 Deletion 4 HET FN3501-S Chr5 19693507 19693828 0 0 Deletion 321 HET FN3501-S Chr6 24164521 24164533 0 0 Deletion 12 HET FN3501-S Chr8 22345607 22345608 0 0 Deletion 1 HET FN3501-S Chr10 1220827 1220828 0 0 Deletion 1 frameshift_variant HET LOC_Os10g02960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3501-S Chr3 18033506 18260801 0 0 Inversion 0 LOC_Os03g31594 jmjC domain containing protein, expressed FN3501-S Chr4 19311294 19577554 0 0 Inversion 0 FN3501-S Chr4 19311295 19577558 0 0 Inversion 0 FN3501-S Chr4 13036348 Chr3 25422753 0 Translocation 0 LOC_Os04g22970 retrotransposon protein, putative, unclassified, expressed FN3501-S Chr6 6822542 Chr4 27350911 0 Translocation 0 FN3501-S Chr6 11389238 Chr2 32367143 0 Translocation 0 LOC_Os06g19900 retrotransposon protein, putative, unclassified, expressed FN3501-S Chr6 11418533 Chr2 32367928 0 Translocation 0 LOC_Os06g19940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3501-S Chr7 29348830 Chr4 12000 0 Translocation 0 LOC_Os07g49010 TOPBP1B - Similar to DNA replication protein TOPBP1 from, expressed FN3501-S Chr8 11049873 Chr2 33015485 0 Translocation 0 LOC_Os08g18000 OsFBX283 - F-box domain containing protein, expressed FN3501-S Chr9 9357365 Chr6 29946007 0 Translocation 0 FN3501-S Chr10 12025660 Chr9 9357191 0 Translocation 0 FN3501-S Chr11 18175770 Chr2 18602801 0 Translocation 0 FN3501-S Chr11 18175856 Chr2 18603962 0 Translocation 0 FN3501-S Chr12 12920267 Chr7 11679979 0 Translocation 0 FN3501-S Chr12 21257844 Chr10 16395158 0 Translocation 0 FN3501-S Chr4 13036348 Chr3 25422753 0 Translocation 0 LOC_Os03g45040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3501-S Chr9 9357365 Chr6 29946007 0 Translocation 0 LOC_Os06g49420 retrotransposon protein, putative, unclassified, expressed FN3501-S Chr12 12920267 Chr7 11679979 0 Translocation 0 LOC_Os07g20260 expressed protein