FN3945-S Chr1 4214677 T-A 0 0 Single Base Substitution 0 HET FN3945-S Chr1 4214678 C-T 0 0 Single Base Substitution 0 HET FN3945-S Chr1 25377999 T-C 0 0 Single Base Substitution 0 HET FN3945-S Chr1 40211801 A-G 0 0 Single Base Substitution 0 HET FN3945-S Chr2 3755620 C-T 0 0 Single Base Substitution 0 Homo FN3945-S Chr2 19257742 A-G 0 0 Single Base Substitution 0 HET FN3945-S Chr3 8832744 C-A 0 0 Single Base Substitution 0 HET FN3945-S Chr3 20109425 A-G 0 0 Single Base Substitution 0 Homo FN3945-S Chr3 25004798 T-C 0 0 Single Base Substitution 0 Homo FN3945-S Chr4 6875818 C-T 0 0 Single Base Substitution 0 Homo FN3945-S Chr4 27195816 C-T 0 0 Single Base Substitution 0 HET FN3945-S Chr5 3067819 G-A 0 0 Single Base Substitution 0 HET FN3945-S Chr5 8825879 C-T 0 0 Single Base Substitution 0 HET FN3945-S Chr5 15940373 C-T 0 0 Single Base Substitution 0 Homo FN3945-S Chr6 10146362 C-T 0 0 Single Base Substitution 0 HET FN3945-S Chr6 13579431 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g23260 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3945-S Chr6 21230561 G-A 0 0 Single Base Substitution 0 Homo FN3945-S Chr6 23947295 T-C 0 0 Single Base Substitution 0 HET FN3945-S Chr7 4882604 T-G 0 0 Single Base Substitution 0 Homo FN3945-S Chr7 6446308 A-T 0 0 Single Base Substitution 0 Homo FN3945-S Chr7 26760017 G-A 0 0 Single Base Substitution 0 Homo FN3945-S Chr8 17822016 A-G 0 0 Single Base Substitution 0 HET FN3945-S Chr9 14350170 G-T 0 0 Single Base Substitution 0 HET FN3945-S Chr10 3698736 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g07040 chalcone synthase, putative, expressed FN3945-S Chr10 12413275 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g24230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3945-S Chr10 21401910 C-T 0 0 Single Base Substitution 0 HET FN3945-S Chr11 17281525 G-A 0 0 Single Base Substitution 0 Homo FN3945-S Chr11 23690950 C-A 0 0 Single Base Substitution 0 Homo FN3945-S Chr11 25352971 T-A 0 0 Single Base Substitution 0 HET FN3945-S Chr4 30584236 30584236 0 0 Insertion 4 HET FN3945-S Chr10 12414389 12414389 0 0 Insertion 1 frameshift_variant HET LOC_Os10g24230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3945-S Chr8 6448074 6448074 0 0 Insertion 1 HET FN3945-S Chr10 898384 898384 0 0 Insertion 1 HET FN3945-S Chr11 13614651 13614651 0 0 Insertion 1 HET FN3945-S Chr1 10385236 10385249 0 0 Deletion 13 frameshift_variant HET LOC_Os01g18470 transposon protein, putative, unclassified, expressed FN3945-S Chr1 36805859 36805868 0 0 Deletion 9 HET FN3945-S Chr1 38567753 38567764 0 0 Deletion 11 HET FN3945-S Chr1 42826620 42826643 0 0 Deletion 23 frameshift_variant Homo LOC_Os01g73910 peptidase, putative, expressed FN3945-S Chr3 22865538 22865539 0 0 Deletion 1 Homo FN3945-S Chr4 7696942 7696943 0 0 Deletion 1 HET FN3945-S Chr6 3161641 3161655 0 0 Deletion 14 frameshift_variant&splice_acceptor_variant&splice_region_variant&intron_variant HET LOC_Os06g06740 MYB family transcription factor, putative, expressed FN3945-S Chr6 7321841 7321843 0 0 Deletion 2 Homo FN3945-S Chr7 5486422 5486424 0 0 Deletion 2 frameshift_variant Homo LOC_Os07g10200 expressed protein FN3945-S Chr3 19455637 19455890 0 0 Deletion 253 HET FN3945-S Chr6 4825115 4825144 0 0 Deletion 29 HET FN3945-S Chr8 14086576 14086662 0 0 Deletion 86 HET FN3945-S Chr5 27345040 27729818 0 0 Inversion 0 LOC_Os05g48370 expressed protein FN3945-S Chr5 27383196 27729827 0 0 Inversion 0 LOC_Os05g48370 expressed protein FN3945-S Chr3 7727247 Chr1 40716067 0 Translocation 0 LOC_Os01g70310 inducer of CBF expression 2, putative, expressed FN3945-S Chr5 27378018 Chr3 7646159 0 Translocation 0 LOC_Os05g47780 E3 ubiquitin ligase, putative, expressed FN3945-S Chr7 13890993 Chr4 15170551 0 Translocation 0 FN3945-S Chr8 3817869 Chr7 1714311 0 Translocation 0 LOC_Os07g04040 expressed protein FN3945-S Chr8 18071293 Chr5 17231133 0 Translocation 0 LOC_Os08g29480 retrotransposon protein, putative, unclassified, expressed FN3945-S Chr8 18071313 Chr1 18734066 0 Translocation 0 LOC_Os08g29480 retrotransposon protein, putative, unclassified, expressed FN3945-S Chr11 17323888 Chr5 27378015 0 Translocation 0 LOC_Os11g29840 expressed protein FN3945-S Chr11 17323893 Chr5 27345052 0 Translocation 0 LOC_Os11g29840 expressed protein FN3945-S Chr12 10086949 Chr5 27382819 0 Translocation 0 FN3945-S Chr12 18617608 Chr5 27383190 0 Translocation 0 FN3945-S Chr8 18071293 Chr5 17231133 0 Translocation 0 LOC_Os05g29780 retrotransposon protein, putative, unclassified, expressed FN3945-S Chr8 18071313 Chr1 18734066 0 Translocation 0 LOC_Os01g34030 retrotransposon protein, putative, unclassified, expressed FN3945-S Chr11 17323888 Chr5 27378015 0 Translocation 0 LOC_Os05g47780 E3 ubiquitin ligase, putative, expressed