FN4125-S Chr1 12246076 T-A 0 0 Single Base Substitution 0 Homo FN4125-S Chr1 40685653 T-A 0 0 Single Base Substitution 0 HET FN4125-S Chr2 8813917 C-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os02g15660 tetratricopeptide repeat, putative, expressed FN4125-S Chr2 14494614 C-T 0 0 Single Base Substitution 0 Homo FN4125-S Chr2 16304844 T-A 0 0 Single Base Substitution 0 Homo FN4125-S Chr3 13680781 T-A 0 0 Single Base Substitution 0 HET FN4125-S Chr3 36055048 T-C 0 0 Single Base Substitution 0 HET FN4125-S Chr4 1538725 C-T 0 0 Single Base Substitution 0 Homo FN4125-S Chr4 12512948 G-A 0 0 Single Base Substitution 0 Homo FN4125-S Chr4 14117070 C-A 0 0 Single Base Substitution 0 HET FN4125-S Chr5 1346825 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g03310 expressed protein FN4125-S Chr6 11367176 G-C 0 0 Single Base Substitution 0 HET FN4125-S Chr7 8425294 G-A 0 0 Single Base Substitution 0 Homo FN4125-S Chr7 8425295 G-A 0 0 Single Base Substitution 0 Homo FN4125-S Chr7 22166655 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g36990 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4125-S Chr8 2017524 T-A 0 0 Single Base Substitution 0 HET FN4125-S Chr8 26580090 C-G 0 0 Single Base Substitution 0 HET FN4125-S Chr8 27948970 G-A 0 0 Single Base Substitution 0 HET FN4125-S Chr9 6162278 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g11110 retrotransposon protein, putative, unclassified, expressed FN4125-S Chr9 19286134 T-A 0 0 Single Base Substitution 0 HET FN4125-S Chr11 18546914 T-C 0 0 Single Base Substitution 0 Homo FN4125-S Chr12 8954890 G-T 0 0 Single Base Substitution 0 Homo FN4125-S Chr1 10534822 10534822 0 0 Insertion 8 HET FN4125-S Chr11 9325218 9325218 0 0 Insertion 2 HET FN4125-S Chr11 28945374 28945374 0 0 Insertion 2 HET FN4125-S Chr3 18716593 18716593 0 0 Insertion 1 HET FN4125-S Chr4 11627090 11627090 0 0 Insertion 1 HET FN4125-S Chr12 11689896 11689896 0 0 Insertion 1 HET FN4125-S Chr12 20256830 20256830 0 0 Insertion 1 HET FN4125-S Chr12 25851987 25851987 0 0 Insertion 1 frameshift_variant&stop_gained HET LOC_Os12g41730 retrotransposon protein, putative, unclassified, expressed FN4125-S Chr1 20214537 20214541 0 0 Deletion 4 frameshift_variant HET LOC_Os01g36420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4125-S Chr7 4229008 4229011 0 0 Deletion 3 Homo FN4125-S Chr7 7182718 7182720 0 0 Deletion 2 frameshift_variant Homo LOC_Os07g12580 expressed protein FN4125-S Chr11 14837915 14837918 0 0 Deletion 3 HET FN4125-S Chr11 22021380 22021391 0 0 Deletion 11 Homo FN4125-S Chr11 12118512 12118700 0 0 Deletion 188 HET FN4125-S Chr1 37090001 37160000 0 0 Deletion 69999 LOC_Os01g63920 hypothetical protein FN4125-S Chr1 37090001 37160000 0 0 Deletion 69999 LOC_Os01g63930 cytochrome P450, putative, expressed FN4125-S Chr1 37090001 37160000 0 0 Deletion 69999 LOC_Os01g63940 Transcription initiation factor TFIID subunit A containing protein, expressed FN4125-S Chr1 37090001 37160000 0 0 Deletion 69999 LOC_Os01g63950 expressed protein FN4125-S Chr1 37090001 37160000 0 0 Deletion 69999 LOC_Os01g63960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4125-S Chr1 37090001 37160000 0 0 Deletion 69999 LOC_Os01g63970 sialyltransferase family domain containing protein, expressed FN4125-S Chr1 37090001 37160000 0 0 Deletion 69999 LOC_Os01g63980 ZOS1-17 - C2H2 zinc finger protein, expressed FN4125-S Chr1 37090001 37160000 0 0 Deletion 69999 LOC_Os01g63990 hydrolase, alpha/beta fold family protein, putative, expressed FN4125-S Chr4 26855001 26909000 0 0 Deletion 53999 LOC_Os04g45400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4125-S Chr4 26855001 26909000 0 0 Deletion 53999 LOC_Os04g45410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4125-S Chr4 26855001 26909000 0 0 Deletion 53999 LOC_Os04g45420 retrotransposon protein, putative, unclassified, expressed FN4125-S Chr4 26855001 26909000 0 0 Deletion 53999 LOC_Os04g45430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4125-S Chr4 26855001 26909000 0 0 Deletion 53999 LOC_Os04g45440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4125-S Chr4 26855001 26909000 0 0 Deletion 53999 LOC_Os04g45450 expressed protein FN4125-S Chr4 26855001 26909000 0 0 Deletion 53999 LOC_Os04g45460 cysteine-rich repeat secretory protein precursor, putative, expressed FN4125-S Chr4 26855001 26909000 0 0 Deletion 53999 LOC_Os04g45470 vacuolar-processing enzyme precursor, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45480 heat shock protein STI, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45490 elongation factor, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45500 expressed protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45510 expressed protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45520 integral membrane protein, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45540 retrotransposon protein, putative, unclassified, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45550 retrotransposon protein, putative, unclassified, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45560 hypothetical protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45570 expressed protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45580 kinesin motor domain containing protein, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45590 glyoxalase family protein, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45600 NDH-M H PLASTOQUINONE DEHY, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45610 expressed protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45620 expressed protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45630 expressed protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45640 hypothetical protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45650 expressed protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45665 hypothetical protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45670 src homology-3 domain protein 3, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45690 B-box zinc finger family protein, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45700 COBRA, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45710 expressed protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45720 aldehyde dehydrogenase, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45730 protein kinase domain containing protein, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45740 hypothetical protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45750 expressed protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45760 retrotransposon protein, putative, unclassified FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45770 retrotransposon protein, putative, unclassified, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45780 retrotransposon protein, putative, unclassified, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45790 expressed protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45800 diacylglycerol kinase, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45810 homeobox associated leucine zipper, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45821 expressed protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45834 DUF584 domain containing protein, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45850 transposon protein, putative, unclassified, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45860 transposon protein, putative, unclassified, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45870 expressed protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45880 expressed protein FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45890 retrotransposon protein, putative, unclassified, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45900 transposon protein, putative, unclassified, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45910 placental protein 11 precursor, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45920 protein kinase domain containing protein, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45930 RNA recognition motif containing protein, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45940 transcription factor like protein, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45950 amino acid permease family protein, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45960 OsSub42 - Putative Subtilisin homologue, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45970 glutamate dehydrogenase protein, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45980 glycine-rich cell wall protein, putative, expressed FN4125-S Chr4 26913001 27249000 0 0 Deletion 335999 LOC_Os04g45990 histone-lysine N-methyltransferase, putative, expressed FN4125-S Chr5 3448001 3491000 0 0 Deletion 42999 LOC_Os05g06670 gibberellin 2-oxidase, putative, expressed FN4125-S Chr5 3448001 3491000 0 0 Deletion 42999 LOC_Os05g06680 expressed protein FN4125-S Chr5 3448001 3491000 0 0 Deletion 42999 LOC_Os05g06690 HECT-domain domain containing protein, expressed FN4125-S Chr5 3448001 3491000 0 0 Deletion 42999 LOC_Os05g06700 expressed protein FN4125-S Chr4 33501718 Chr2 18529809 0 Translocation 0 LOC_Os04g56180 peroxidase precursor, putative, expressed FN4125-S Chr4 33503436 Chr2 18529808 0 Translocation 0 LOC_Os04g56180 peroxidase precursor, putative, expressed FN4125-S Chr10 20201255 Chr1 37159694 0 Translocation 0 LOC_Os10g37740 CGMC_GSK.9 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed FN4125-S Chr10 20201329 Chr1 37163254 0 Translocation 0 LOC_Os10g37740 CGMC_GSK.9 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed FN4125-S Chr12 8220867 Chr4 3485801 0 Translocation 0 LOC_Os12g14420 retrotransposon protein, putative, Ty3-gypsy subclass FN4125-S Chr4 33501718 Chr2 18529809 0 Translocation 0 LOC_Os02g31020 expressed protein FN4125-S Chr4 33503436 Chr2 18529808 0 Translocation 0 LOC_Os02g31020 expressed protein FN4125-S Chr12 8220867 Chr4 3485801 0 Translocation 0 LOC_Os04g06610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed