FN4448-S Chr1 3136810 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4448-S Chr1 21160539 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g37825 M16 domain containing zinc peptidase, putative, expressed FN4448-S Chr1 35045078 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g60620 retrotransposon protein, putative, unclassified, expressed FN4448-S Chr2 17026277 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4448-S Chr2 17559029 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4448-S Chr2 19595861 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4448-S Chr2 24633814 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4448-S Chr3 8957525 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4448-S Chr3 22697242 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4448-S Chr3 33657222 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4448-S Chr3 35849607 A-C 0 0 Single Base Substitution 0 INTRON HET FN4448-S Chr4 5998762 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4448-S Chr4 6772989 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g12260 retrotransposon protein, putative, Ty3-gypsy subclass FN4448-S Chr4 7540165 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN4448-S Chr4 24653297 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4448-S Chr4 30535965 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4448-S Chr5 5498490 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4448-S Chr5 16448270 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os05g28120 transposon protein, putative, unclassified, expressed FN4448-S Chr5 20713290 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4448-S Chr5 28219369 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4448-S Chr6 4888989 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4448-S Chr6 11080609 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4448-S Chr6 15908368 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4448-S Chr7 6485608 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4448-S Chr7 9516043 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4448-S Chr7 19351877 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4448-S Chr9 22833103 G-A 0 0 Single Base Substitution 0 INTRON HET FN4448-S Chr10 3198927 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4448-S Chr10 5104504 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4448-S Chr11 14816189 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN4448-S Chr11 22278435 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g37700 pleiotropic drug resistance protein, putative, expressed FN4448-S Chr12 9229162 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4448-S Chr1 24826560 24826563 0 0 Deletion 3 HOMO FN4448-S Chr3 27364357 27364374 0 0 Deletion 17 HOMO FN4448-S Chr8 24526936 24526937 0 0 Deletion 1 HOMO LOC_Os08g38800 retrotransposon protein, putative, unclassified, expressed FN4448-S Chr10 21173471 21173476 0 0 Deletion 5 HOMO FN4448-S Chr11 5830276 5830288 0 0 Deletion 12 HOMO FN4448-S Chr1 27352878 27352889 0 0 Deletion 11 HOMO FN4448-S Chr1 34011951 34011960 0 0 Deletion 9 HOMO FN4448-S Chr2 1504979 1504980 0 0 Deletion 1 HOMO FN4448-S Chr2 7873713 7873714 0 0 Deletion 1 HOMO FN4448-S Chr2 22797259 22797282 0 0 Deletion 23 HOMO FN4448-S Chr3 31640656 31640677 0 0 Deletion 21 HOMO FN4448-S Chr4 14391659 14391660 0 0 Deletion 1 HOMO FN4448-S Chr4 27002727 27002728 0 0 Deletion 1 HOMO FN4448-S Chr4 28567804 28567805 0 0 Deletion 1 HOMO FN4448-S Chr5 4078674 4078675 0 0 Deletion 1 HOMO FN4448-S Chr5 5098881 5098886 0 0 Deletion 5 HOMO FN4448-S Chr5 9514456 9514457 0 0 Deletion 1 HOMO FN4448-S Chr5 21509511 21509512 0 0 Deletion 1 HOMO FN4448-S Chr5 24917968 24917969 0 0 Deletion 1 HOMO FN4448-S Chr5 25899944 25899946 0 0 Deletion 2 HOMO FN4448-S Chr5 26451369 26451370 0 0 Deletion 1 HOMO FN4448-S Chr6 4568073 4568077 0 0 Deletion 4 HOMO FN4448-S Chr6 6139360 6139361 0 0 Deletion 1 HOMO FN4448-S Chr6 29273253 29273254 0 0 Deletion 1 HOMO FN4448-S Chr7 7250670 7250691 0 0 Deletion 21 HOMO FN4448-S Chr7 11986830 11986833 0 0 Deletion 3 HOMO LOC_Os07g20720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4448-S Chr7 12248430 12248590 0 0 Deletion 160 HOMO FN4448-S Chr7 17385492 17385493 0 0 Deletion 1 HOMO FN4448-S Chr9 4640223 4640224 0 0 Deletion 1 HOMO FN4448-S Chr9 11674405 11674406 0 0 Deletion 1 HOMO FN4448-S Chr10 3303955 3303956 0 0 Deletion 1 HOMO LOC_Os10g06430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4448-S Chr10 6916854 6916856 0 0 Deletion 2 HOMO FN4448-S Chr10 18062846 18062874 0 0 Deletion 28 HOMO FN4448-S Chr11 1476322 1476323 0 0 Deletion 1 HOMO FN4448-S Chr11 2654179 2654180 0 0 Deletion 1 HOMO FN4448-S Chr11 12093572 12093575 0 0 Deletion 3 HOMO FN4448-S Chr11 18214172 18214173 0 0 Deletion 1 HOMO FN4448-S Chr11 27075273 27075274 0 0 Deletion 1 HOMO FN4448-S Chr12 2792546 2792547 0 0 Deletion 1 HOMO FN4448-S Chr12 8512534 8512535 0 0 Deletion 1 HOMO FN4448-S Chr12 18795655 18795656 0 0 Deletion 1 HOMO FN4448-S Chr12 25678009 25678015 0 0 Deletion 6 HOMO LOC_Os12g41450 F-box domain containing protein, expressed FN4448-S Chr1 23701485 23701485 0 0 Insertion 2 HOMO FN4448-S Chr1 23978506 23978506 0 0 Insertion 4 HOMO FN4448-S Chr1 40326882 40326882 0 0 Insertion 3 HET FN4448-S Chr3 7879046 7879046 0 0 Insertion 1 HET FN4448-S Chr4 6138151 6138151 0 0 Insertion 1 HOMO FN4448-S Chr9 19488586 19488586 0 0 Insertion 2 HET FN4448-S Chr12 5559813 5559813 0 0 Insertion 5 HET FN4448-S Chr1 9031972 9031972 0 0 Insertion 1 HET FN4448-S Chr1 12346137 12346137 0 0 Insertion 1 HET FN4448-S Chr1 32723184 32723184 0 0 Insertion 1 HET FN4448-S Chr3 3764594 3764594 0 0 Insertion 1 HET FN4448-S Chr3 4143497 4143497 0 0 Insertion 1 HET FN4448-S Chr3 17521048 17521048 0 0 Insertion 1 HET FN4448-S Chr3 32241562 32241562 0 0 Insertion 1 HET FN4448-S Chr4 2332045 2332045 0 0 Insertion 1 HET FN4448-S Chr4 6552732 6552732 0 0 Insertion 1 HET FN4448-S Chr4 10471975 10471975 0 0 Insertion 1 HET FN4448-S Chr4 22704544 22704544 0 0 Insertion 1 HET FN4448-S Chr4 23166864 23166864 0 0 Insertion 1 HET FN4448-S Chr4 31847295 31847295 0 0 Insertion 1 HET FN4448-S Chr5 1634299 1634299 0 0 Insertion 1 HET FN4448-S Chr5 6363883 6363883 0 0 Insertion 56 HET FN4448-S Chr5 8183528 8183528 0 0 Insertion 1 HET FN4448-S Chr5 11217752 11217752 0 0 Insertion 1 HET FN4448-S Chr5 11681775 11681775 0 0 Insertion 1 HET FN4448-S Chr5 15726091 15726091 0 0 Insertion 29 HET FN4448-S Chr5 17598412 17598412 0 0 Insertion 1 HET FN4448-S Chr5 29179565 29179565 0 0 Insertion 1 HET FN4448-S Chr6 12548252 12548252 0 0 Insertion 1 HET FN4448-S Chr7 9803253 9803253 0 0 Insertion 1 HET FN4448-S Chr8 1323309 1323309 0 0 Insertion 1 HET FN4448-S Chr8 7317272 7317272 0 0 Insertion 3 HET FN4448-S Chr8 14469275 14469275 0 0 Insertion 1 HET FN4448-S Chr9 576355 576355 0 0 Insertion 2 HET FN4448-S Chr10 6931474 6931474 0 0 Insertion 1 HET FN4448-S Chr10 8357868 8357868 0 0 Insertion 1 HET FN4448-S Chr10 20234735 20234735 0 0 Insertion 2 HET FN4448-S Chr11 581650 581650 0 0 Insertion 12 HET FN4448-S Chr11 1032498 1032498 0 0 Insertion 1 HET FN4448-S Chr11 16183446 16183446 0 0 Insertion 1 HET FN4448-S Chr12 8453895 8453895 0 0 Insertion 2 HET FN4448-S Chr12 9852480 9852480 0 0 Insertion 2 HET FN4448-S Chr12 15228442 15228442 0 0 Insertion 14 HET LOC_Os12g26140 retrotransposon protein, putative, unclassified, expressed FN4448-S Chr12 22682846 22682846 0 0 Insertion 1 HET FN4448-S Chr10 1315001 1334000 0 0 Deletion 19000 HOMO LOC_Os10g03140 retrotransposon protein, putative, unclassified, expressed FN4448-S Chr10 1315001 1334000 0 0 Deletion 19000 HOMO LOC_Os10g03110 retrotransposon protein, putative, unclassified, expressed FN4448-S Chr10 1315001 1334000 0 0 Deletion 19000 HOMO LOC_Os10g03150 retrotransposon protein, putative, unclassified FN4448-S Chr10 1315001 1334000 0 0 Deletion 19000 HOMO LOC_Os10g03130 retrotransposon protein, putative, unclassified, expressed FN4448-S Chr10 1315001 1334000 0 0 Deletion 19000 HOMO LOC_Os10g03120 retrotransposon protein, putative, unclassified, expressed FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03530 CAF1 family ribonuclease containing protein, putative, expressed FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03560 CAF1 family ribonuclease containing protein, putative, expressed FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03600 OsFBX343 - F-box domain containing protein, expressed FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03540 ribosomal protein L7Ae, putative, expressed FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03500 expressed protein FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03620 OsFBX344 - F-box domain containing protein, expressed FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03490 expressed protein FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03480 cyclin-dependent kinase G-1, putative, expressed FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03590 hypothetical protein FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03640 expressed protein FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03570 RGH1A, putative, expressed FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03610 heat shock protein DnaJ, putative, expressed FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03550 expressed protein FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03520 expressed protein FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03510 hypothetical protein FN4448-S Chr10 1493001 1595000 0 0 Deletion 102000 HOMO LOC_Os10g03630 hypothetical protein FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33770 importin-beta N-terminal domain containing protein, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33862 expressed protein FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33855 expressed protein FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33954 hypothetical protein FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g34040 nodulin, putative, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33840 expressed protein FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33960 START domain containing protein, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33970 double-stranded RNA binding motif containing protein, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33780 DUF640 domain containing protein, putative, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33800 lactate/malate dehydrogenase, putative, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33810 myb-related protein Myb4, putative, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33874 PPR repeat domain containing protein, putative, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g34010 expressed protein FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g34050 expressed protein FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33980 thiamine pyrophosphate enzyme, N-terminal TPP binding domain containing protein, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33900 possible lysine decarboxylase domain containing protein, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33910 mitochondrial import inner membrane translocase subunit Tim16, putative, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33820 expressed protein FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33950 retrotransposon protein, putative, unclassified, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33990 DUF584 domain containing protein, putative, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g34020 glutathione S-transferase, putative, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33850 Exo70 exocyst complex subunit family, putative, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33830 MATH domain containing protein, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33920 transporter-related, putative, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33930 DUF1336 domain containing protein, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33774 leucoanthocyanidin reductase, putative, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g34030 zinc finger, C3HC4 type domain containing protein, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33790 expressed protein FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33760 No apical meristem protein, putative, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33886 expressed protein FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g34000 aquaporin protein, putative, expressed FN4448-S Chr10 17848001 18183000 0 0 Deletion 335000 HET LOC_Os10g33940 auxin response factor 18, putative, expressed FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34240 expressed protein FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34220 TKL_IRAK_DUF26-lf.1 - DUF26 kinases have homology to DUF26 containing loci, expressed FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34310 PPR repeat containing protein, expressed FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34130 nodulin, putative, expressed FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34140 conserved hypothetical protein FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34170 glutaredoxin domain containing protein, putative, expressed FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34230 cytokinin dehydrogenase precursor, putative, expressed FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34150 nodulin, putative, expressed FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34110 expressed protein FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34120 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34200 expressed protein FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34260 expressed protein FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34280 expressed protein FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34270 expressed protein FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34290 retrotransposon protein, putative, unclassified, expressed FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34300 OsFBX387 - F-box domain containing protein, expressed FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34320 ribosomal L18p/L5e family protein, expressed FN4448-S Chr10 18201001 18302000 0 0 Deletion 101000 HET LOC_Os10g34180 transcription factor BTF3, putative, expressed FN4448-S Chr4 19119507 Chr2 22665665 0 Translocation 0 HET FN4448-S Chr4 31826025 Chr2 4174006 0 Translocation 0 HET LOC_Os04g53450 expressed protein FN4448-S Chr9 8711177 Chr8 15782154 0 Translocation 0 HET FN4448-S Chr9 16416495 Chr2 2673873 0 Translocation 0 HET FN4448-S Chr10 1315288 Chr4 20910470 0 Translocation 0 HOMO LOC_Os10g03110 retrotransposon protein, putative, unclassified, expressed FN4448-S Chr10 1315288 Chr4 20910470 0 Translocation 0 HOMO LOC_Os04g03150 retrotransposon protein, putative, unclassified, expressed FN4448-S Chr10 1315401 Chr4 20910469 0 Translocation 0 HOMO LOC_Os10g03110 retrotransposon protein, putative, unclassified, expressed FN4448-S Chr10 1315401 Chr4 20910469 0 Translocation 0 HOMO LOC_Os04g03150 retrotransposon protein, putative, unclassified, expressed FN4448-S Chr10 10355522 Chr8 15782149 0 Translocation 0 HET LOC_Os08g16910 dehydrogenase, putative, expressed FN4448-S Chr6 24684608 24730205 0 0 Inversion 45598 HOMO