FN4584-S Chr1 11160995 G-C 0 0 Single Base Substitution 0 HET FN4584-S Chr1 12715900 12715900 0 0 Deletion 1 HET FN4584-S Chr1 15578111 15578112 0 0 Deletion 2 HET FN4584-S Chr1 16118328 16118439 0 0 Inversion 111 HET FN4584-S Chr1 20611921 20611969 0 0 Deletion 49 HET FN4584-S Chr1 25661465 G-A 0 0 Single Base Substitution 0 HOMO FN4584-S Chr1 32851213 32851213 0 0 Insertion 2 HET FN4584-S Chr1 34055245 G-A 0 0 Single Base Substitution 0 HOMO LOC_Os01g58920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr1 34055246 T-A 0 0 Single Base Substitution 0 HOMO LOC_Os01g58920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr1 36382723 T-C 0 0 Single Base Substitution 0 HET LOC_Os01g62810 regulator of chromosome condensation, putative, expressed FN4584-S Chr1 38043866 38043866 0 0 Deletion 1 HET FN4584-S Chr1 6346913 C-T 0 0 Single Base Substitution 0 HET FN4584-S Chr1 7497978 7497978 0 0 Insertion 3 HET FN4584-S Chr1 8641720 G-T 0 0 Single Base Substitution 0 HET FN4584-S Chr1 9514665 9514666 0 0 Deletion 2 HET FN4584-S Chr10 10198047 10198047 0 0 Deletion 1 HET LOC_Os10g20280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4584-S Chr10 12896058 A-G 0 0 Single Base Substitution 0 HET FN4584-S Chr10 1366400 1366400 0 0 Deletion 1 HOMO FN4584-S Chr10 18029156 18029157 0 0 Deletion 2 HOMO FN4584-S Chr10 19546145 C-T 0 0 Single Base Substitution 0 HOMO LOC_Os10g36530 mutS domain V family protein, expressed FN4584-S Chr10 3749540 4198236 0 0 Inversion 448696 HET FN4584-S Chr10 6152570 6152570 0 0 Insertion 1 HET FN4584-S Chr11 1480409 G-T 0 0 Single Base Substitution 0 HET FN4584-S Chr11 27044991 27044991 0 0 Insertion 1 HET FN4584-S Chr11 27379964 27379964 0 0 Insertion 1 HET FN4584-S Chr11 3674808 3674808 0 0 Deletion 1 HET FN4584-S Chr11 8209317 8209363 0 0 Deletion 47 HET FN4584-S Chr11 8265289 C-T 0 0 Single Base Substitution 0 HET FN4584-S Chr12 12913292 T-C 0 0 Single Base Substitution 0 HET FN4584-S Chr12 14257567 G-A 0 0 Single Base Substitution 0 HET FN4584-S Chr12 15273673 15273673 0 0 Deletion 1 HET FN4584-S Chr12 17883816 17883816 0 0 Insertion 2 HET FN4584-S Chr12 21860853 21860853 0 0 Deletion 1 HET FN4584-S Chr12 22666749 22666749 0 0 Insertion 110 HET FN4584-S Chr12 23188500 23188500 0 0 Deletion 1 HET FN4584-S Chr12 24142010 G-A 0 0 Single Base Substitution 0 HET FN4584-S Chr12 26336025 C-T 0 0 Single Base Substitution 0 HOMO LOC_Os12g42370 GTPase of unknown function domain containing protein, putative, expressed FN4584-S Chr12 26437088 26437088 0 0 Insertion 1 HET FN4584-S Chr12 7851717 7851720 0 0 Deletion 4 HET FN4584-S Chr2 21803328 21803328 0 0 Deletion 1 HET FN4584-S Chr2 28920718 C-T 0 0 Single Base Substitution 0 HET FN4584-S Chr2 34727403 34727403 0 0 Insertion 1 HET LOC_Os02g56640 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr2 4402124 C-T 0 0 Single Base Substitution 0 HOMO FN4584-S Chr3 18536965 18536965 0 0 Insertion 1 HET FN4584-S Chr3 2896077 T-A 0 0 Single Base Substitution 0 HET FN4584-S Chr3 31638455 31638455 0 0 Deletion 1 HET FN4584-S Chr3 8291568 T-C 0 0 Single Base Substitution 0 HET FN4584-S Chr4 1107469 1107469 0 0 Deletion 1 HET FN4584-S Chr4 11306610 G-A 0 0 Single Base Substitution 0 HET FN4584-S Chr4 1384777 Chr2 7913879 Translocation 0 HET LOC_Os04g03250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr4 14599666 14599666 0 0 Deletion 1 HET FN4584-S Chr4 15168509 15168509 0 0 Deletion 1 HET FN4584-S Chr4 23681154 23681154 0 0 Insertion 1 HET FN4584-S Chr4 31431238 C-T 0 0 Single Base Substitution 0 HET FN4584-S Chr4 31882829 A-G 0 0 Single Base Substitution 0 HET FN4584-S Chr4 8908813 G-C 0 0 Single Base Substitution 0 HET FN4584-S Chr4 9785425 9785425 0 0 Insertion 1 HET LOC_Os04g17840 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr5 11146617 11146617 0 0 Insertion 1 HET FN4584-S Chr5 1140745 1140745 0 0 Insertion 14 HET FN4584-S Chr5 14472231 G-T 0 0 Single Base Substitution 0 HET FN4584-S Chr5 16616750 T-A 0 0 Single Base Substitution 0 HET FN4584-S Chr5 20083529 20083529 0 0 Insertion 3 HET FN4584-S Chr5 21534591 21534591 0 0 Insertion 1 HET FN4584-S Chr5 21648064 T-C 0 0 Single Base Substitution 0 HOMO FN4584-S Chr5 29951853 29951853 0 0 Deletion 1 HET FN4584-S Chr5 29952188 29952189 0 0 Deletion 2 HET FN4584-S Chr5 8568150 Chr2 17632024 Translocation 0 HET LOC_Os02g29640 transposon protein, putative, unclassified, expressed FN4584-S Chr5 8568150 Chr2 17632024 Translocation 0 HET LOC_Os05g15090 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr5 8568594 Chr2 17632019 Translocation 0 HET LOC_Os02g29640 transposon protein, putative, unclassified, expressed FN4584-S Chr5 8568594 Chr2 17632019 Translocation 0 HET LOC_Os05g15090 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr5 9805000 A-T 0 0 Single Base Substitution 0 HOMO FN4584-S Chr6 11682843 G-C 0 0 Single Base Substitution 0 HET FN4584-S Chr6 14672992 15225668 0 0 Inversion 552676 HET FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25120 retrotransposon protein, putative, unclassified FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25130 expressed protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25140 retrotransposon protein, putative, Ty3-gypsy subclass FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25150 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25170 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25180 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25190 retrotransposon protein, putative, unclassified FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25200 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25210 retrotransposon, putative, centromere-specific, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25220 retrotransposon protein, putative, unclassified FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25230 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25240 expressed protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25250 endoribonuclease Dicer, putative, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25260 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25270 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25280 retrotransposon, putative, centromere-specific, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25290 retrotransposon protein, putative, Ty3-gypsy subclass FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25294 60S ribosomal protein L18a-1, putative, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25300 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25310 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25330 retrotransposon protein, putative, unclassified FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25340 hypothetical protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25350 retrotransposon protein, putative, unclassified FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25360 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25370 retrotransposon protein, putative, unclassified FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25380 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25390 hypothetical protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25410 hypothetical protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25420 expressed protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25439 NAD dependent epimerase/dehydratase family protein, putative, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25460 expressed protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25470 expressed protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25500 expressed protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25510 expressed protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25520 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25530 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25540 expressed protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25550 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25560 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25570 hypothetical protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25580 transposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25590 expressed protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25600 hypothetical protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25605 expressed protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25610 transposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25620 retrotransposon protein, putative, Ty3-gypsy subclass FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25630 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25640 retrotransposon protein, putative, unclassified FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25650 retrotransposon protein, putative, Ty3-gypsy subclass FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25660 transposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25670 expressed protein FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25680 transposon protein, putative, CACTA, En/Spm sub-class FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25690 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25700 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25710 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25720 transposon protein, putative, CACTA, En/Spm sub-class FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25730 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25740 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25750 retrotransposon protein, putative, Ty3-gypsy subclass FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25790 retrotransposon protein, putative, Ty3-gypsy subclass FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25800 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25820 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25830 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25850 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25870 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25880 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25890 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25900 retrotransposon protein, putative, unclassified, expressed FN4584-S Chr6 14692001 15169000 0 0 Deletion 477000 HET LOC_Os06g25910 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4584-S Chr6 15170320 15205986 0 0 Inversion 35666 HET FN4584-S Chr6 22866738 22866738 0 0 Deletion 1 HET FN4584-S Chr6 25557294 25557306 0 0 Deletion 13 HET FN4584-S Chr6 26792533 G-A 0 0 Single Base Substitution 0 HOMO FN4584-S Chr6 30712942 30712942 0 0 Deletion 1 HET FN4584-S Chr6 7466026 7466026 0 0 Insertion 4 HET FN4584-S Chr6 9936152 C-T 0 0 Single Base Substitution 0 HOMO FN4584-S Chr7 11782994 11782994 0 0 Deletion 1 HET FN4584-S Chr7 12201033 12201362 0 0 Deletion 330 HET FN4584-S Chr7 17031269 17031269 0 0 Insertion 1 HET FN4584-S Chr7 17900795 A-T 0 0 Single Base Substitution 0 HOMO FN4584-S Chr7 20033310 20033310 0 0 Deletion 1 HOMO FN4584-S Chr7 20670882 20670882 0 0 Insertion 1 HET FN4584-S Chr7 21968187 21968278 0 0 Deletion 92 HET FN4584-S Chr7 22889532 22889532 0 0 Deletion 1 HOMO FN4584-S Chr7 27349463 27349463 0 0 Insertion 3 HET LOC_Os07g45830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4584-S Chr7 28627339 28627339 0 0 Deletion 1 HET FN4584-S Chr7 6536486 6536554 0 0 Deletion 69 HET FN4584-S Chr7 8037271 T-C 0 0 Single Base Substitution 0 HOMO FN4584-S Chr7 8994596 T-C 0 0 Single Base Substitution 0 HOMO FN4584-S Chr7 9871334 9871334 0 0 Insertion 24 HET FN4584-S Chr8 10043247 10043247 0 0 Insertion 24 HET FN4584-S Chr8 1332304 1332304 0 0 Insertion 1 HET FN4584-S Chr8 25707554 Chr7 9985990 Translocation 0 HET FN4584-S Chr8 2766268 2766268 0 0 Deletion 1 HOMO FN4584-S Chr8 7283058 7283058 0 0 Deletion 1 HET FN4584-S Chr8 8017311 8017311 0 0 Insertion 2 HOMO FN4584-S Chr8 8537079 8537079 0 0 Deletion 1 HET FN4584-S Chr8 8781016 8781035 0 0 Deletion 20 HOMO FN4584-S Chr8 9575698 A-G 0 0 Single Base Substitution 0 HOMO FN4584-S Chr9 11328800 11328800 0 0 Deletion 1 HET FN4584-S Chr9 13392623 T-C 0 0 Single Base Substitution 0 HOMO FN4584-S Chr9 16033820 T-A 0 0 Single Base Substitution 0 HET FN4584-S Chr9 3954200 C-T 0 0 Single Base Substitution 0 HET FN4584-S Chr9 3954237 C-A 0 0 Single Base Substitution 0 HET FN4584-S Chr9 5223658 5223658 0 0 Deletion 1 HET